Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SNORA31.8-201ENST00000516327 108 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.99□□□□□ -1.77
COL20A1Q9P218 AC109635.3-201ENST00000529536 185 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.99□□□□□ -1.77
COL20A1Q9P218 MIR3921-201ENST00000577308 85 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 BDH2P1-201ENST00000602288 736 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL20A1Q9P218 AP002826.1-201ENST00000608835 315 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 MIR7851-201ENST00000610611 160 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.99□□□□□ -1.77
COL20A1Q9P218 AP003355.3-201ENST00000623465 114 ntBASIC3.99□□□□□ -1.77
COL20A1Q9P218 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.99□□□□□ -1.77
COL20A1Q9P218 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
COL20A1Q9P218 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL20A1Q9P218 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL20A1Q9P218 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.99□□□□□ -1.77
COL20A1Q9P218 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL20A1Q9P218 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL20A1Q9P218 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
COL20A1Q9P218 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.98□□□□□ -1.77
COL20A1Q9P218 RNU6-600P-201ENST00000362524 99 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 Y_RNA.248-201ENST00000364501 109 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 Y_RNA.453-201ENST00000384223 109 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 MIR1-2-201ENST00000384961 85 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 MIR1277-201ENST00000408536 78 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 MRPL50P2-201ENST00000416821 482 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 AL158156.1-201ENST00000422509 473 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.98□□□□□ -1.77
COL20A1Q9P218 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.98□□□□□ -1.77
COL20A1Q9P218 AC000111.3-201ENST00000433478 193 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 VDAC1P3-201ENST00000434069 851 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 AF228730.2-201ENST00000438784 848 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 RPL21P104-201ENST00000464143 478 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.98□□□□□ -1.77
COL20A1Q9P218 AC092451.1-201ENST00000480211 153 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 AC106872.2-201ENST00000494303 480 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 AC093663.1-201ENST00000497190 394 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 AC026427.2-201ENST00000506228 536 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL20A1Q9P218 AL359273.1-201ENST00000510918 627 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.98□□□□□ -1.77
COL20A1Q9P218 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.98□□□□□ -1.77
COL20A1Q9P218 RN7SKP83-201ENST00000516512 178 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.98□□□□□ -1.77
COL20A1Q9P218 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.98□□□□□ -1.77
COL20A1Q9P218 AP006245.1-201ENST00000522549 120 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 AC104383.1-201ENST00000530297 370 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 RPS3AP4-201ENST00000555161 764 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.98□□□□□ -1.77
COL20A1Q9P218 AL355836.1-201ENST00000555951 870 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 MED28P6-201ENST00000558776 231 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 AC006504.3-201ENST00000586818 523 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL20A1Q9P218 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.98□□□□□ -1.77
COL20A1Q9P218 AC025946.2-201ENST00000603398 234 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.98□□□□□ -1.77
COL20A1Q9P218 AL356321.1-201ENST00000621360 228 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.98□□□□□ -1.77
COL20A1Q9P218 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.98□□□□□ -1.77
COL20A1Q9P218 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.98□□□□□ -1.77
COL20A1Q9P218 MIR3688-2-201ENST00000636963 87 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.98□□□□□ -1.77
COL20A1Q9P218 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL20A1Q9P218 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL20A1Q9P218 MTND5P17-201ENST00000418405 1603 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 MTND5P1-201ENST00000445440 1375 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.98□□□□□ -1.77
COL20A1Q9P218 ZNF680P1-201ENST00000436625 1469 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 AL133383.2-201ENST00000622958 2336 ntBASIC3.98□□□□□ -1.77
COL20A1Q9P218 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.97□□□□□ -1.77
COL20A1Q9P218 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
COL20A1Q9P218 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL20A1Q9P218 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.97□□□□□ -1.77
COL20A1Q9P218 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL20A1Q9P218 XIAPP3-201ENST00000312918 795 ntBASIC3.97□□□□□ -1.77
COL20A1Q9P218 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL20A1Q9P218 Y_RNA.22-201ENST00000362492 102 ntBASIC3.97□□□□□ -1.77
COL20A1Q9P218 RNU6-283P-201ENST00000364788 107 ntBASIC3.97□□□□□ -1.77
COL20A1Q9P218 RNU4-48P-201ENST00000365559 182 ntBASIC3.97□□□□□ -1.77
COL20A1Q9P218 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL20A1Q9P218 SNORA36C-201ENST00000384289 132 ntBASIC3.97□□□□□ -1.77
COL20A1Q9P218 MIR454-201ENST00000390180 115 ntBASIC3.97□□□□□ -1.77
COL20A1Q9P218 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL20A1Q9P218 RNU2-9P-201ENST00000410194 145 ntBASIC3.97□□□□□ -1.77
COL20A1Q9P218 USP9YP27-201ENST00000418455 438 ntBASIC3.97□□□□□ -1.77
COL20A1Q9P218 RPL27AP8-201ENST00000424277 446 ntBASIC3.97□□□□□ -1.77
COL20A1Q9P218 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.97□□□□□ -1.77
COL20A1Q9P218 ELOCP14-201ENST00000428070 331 ntBASIC3.97□□□□□ -1.77
COL20A1Q9P218 AC005326.1-201ENST00000429197 123 ntBASIC3.97□□□□□ -1.77
COL20A1Q9P218 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.97□□□□□ -1.77
COL20A1Q9P218 ELOCP7-201ENST00000439968 331 ntBASIC3.97□□□□□ -1.77
COL20A1Q9P218 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL20A1Q9P218 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.97□□□□□ -1.77
COL20A1Q9P218 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.97□□□□□ -1.77
COL20A1Q9P218 RPL21P10-201ENST00000463521 490 ntBASIC3.97□□□□□ -1.77
COL20A1Q9P218 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
COL20A1Q9P218 RPL36AP51-201ENST00000487216 318 ntBASIC3.97□□□□□ -1.77
COL20A1Q9P218 AC116562.3-201ENST00000506136 177 ntBASIC3.97□□□□□ -1.77
COL20A1Q9P218 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.97□□□□□ -1.77
COL20A1Q9P218 RNU2-27P-201ENST00000516185 142 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms