Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VAPAQ9P0L0 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.1□□□□□ -2.07
VAPAQ9P0L0 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 AC087897.1-201ENST00000550134 156 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.1□□□□□ -2.07
VAPAQ9P0L0 AC234778.2-201ENST00000566241 354 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.1□□□□□ -2.07
VAPAQ9P0L0 LARP7P3-201ENST00000579888 337 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 SNORD53-201ENST00000579969 78 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.1□□□□□ -2.07
VAPAQ9P0L0 MIR5002-201ENST00000584713 97 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 AC069304.2-201ENST00000605154 435 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 AC005000.2-201ENST00000605468 310 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 AC005332.10-201ENST00000612725 619 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 AC009831.4-201ENST00000620744 325 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 AC068880.4-201ENST00000623082 495 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
VAPAQ9P0L0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
VAPAQ9P0L0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
VAPAQ9P0L0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VAPAQ9P0L0 AP005901.5-201ENST00000545779 1796 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 MTND4P27-201ENST00000450813 1354 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 MTND4P35-201ENST00000604257 1375 ntBASIC2.1□□□□□ -2.07
VAPAQ9P0L0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.09□□□□□ -2.07
VAPAQ9P0L0 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
VAPAQ9P0L0 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.09□□□□□ -2.07
VAPAQ9P0L0 RNU6-236P-201ENST00000363886 106 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 SNORA23-201ENST00000365128 182 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
VAPAQ9P0L0 RNU6-637P-201ENST00000384050 107 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 RNU6-1122P-201ENST00000384449 107 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 RNU6-220P-201ENST00000390919 107 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 RPL23AP29-201ENST00000397284 453 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.09□□□□□ -2.07
VAPAQ9P0L0 HMGB1P49-201ENST00000418882 569 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.09□□□□□ -2.07
VAPAQ9P0L0 GTF2IP7-202ENST00000436677 309 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 ATG12P2-201ENST00000456830 416 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.09□□□□□ -2.07
VAPAQ9P0L0 SNORD121B-201ENST00000458838 81 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 RPL30P9-201ENST00000465586 330 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 AC008628.1-201ENST00000508663 265 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.09□□□□□ -2.07
VAPAQ9P0L0 RNU5F-8P-201ENST00000515941 111 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 RNU6-583P-201ENST00000516012 92 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 NRON-201ENST00000517270 370 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 MTCYBP20-201ENST00000524239 1129 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.09□□□□□ -2.07
VAPAQ9P0L0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.09□□□□□ -2.07
VAPAQ9P0L0 AC023825.1-201ENST00000566704 1030 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 AGGF1P5-201ENST00000567900 919 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 AC135628.1-201ENST00000568867 534 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 AC002545.1-201ENST00000592511 181 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 AC136601.2-201ENST00000604356 474 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 AC099785.1-201ENST00000605697 437 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
VAPAQ9P0L0 AC107294.1-201ENST00000609524 467 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 AC008759.3-201ENST00000613300 508 ntBASIC2.09□□□□□ -2.07
VAPAQ9P0L0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.09□□□□□ -2.07
VAPAQ9P0L0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.09□□□□□ -2.07
VAPAQ9P0L0 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.09□□□□□ -2.07
VAPAQ9P0L0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.09□□□□□ -2.07
VAPAQ9P0L0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.09□□□□□ -2.07
VAPAQ9P0L0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
VAPAQ9P0L0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.09□□□□□ -2.08
VAPAQ9P0L0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
VAPAQ9P0L0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.08□□□□□ -2.08
VAPAQ9P0L0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
VAPAQ9P0L0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
VAPAQ9P0L0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VAPAQ9P0L0 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.08□□□□□ -2.08
VAPAQ9P0L0 AC107081.1-201ENST00000414975 361 ntBASIC2.08□□□□□ -2.08
VAPAQ9P0L0 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.08□□□□□ -2.08
VAPAQ9P0L0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.08□□□□□ -2.08
VAPAQ9P0L0 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.08□□□□□ -2.08
VAPAQ9P0L0 USP9YP22-201ENST00000438971 294 ntBASIC2.08□□□□□ -2.08
VAPAQ9P0L0 BX322784.1-201ENST00000455793 1077 ntBASIC2.08□□□□□ -2.08
VAPAQ9P0L0 AL121769.1-201ENST00000469473 401 ntBASIC2.08□□□□□ -2.08
VAPAQ9P0L0 RPS20P22-201ENST00000473700 357 ntBASIC2.08□□□□□ -2.08
VAPAQ9P0L0 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VAPAQ9P0L0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.08□□□□□ -2.08
VAPAQ9P0L0 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.08□□□□□ -2.08
VAPAQ9P0L0 AC023141.11-201ENST00000508864 202 ntBASIC2.08□□□□□ -2.08
VAPAQ9P0L0 MTCYBP16-201ENST00000509187 1129 ntBASIC2.08□□□□□ -2.08
VAPAQ9P0L0 MTCO3P27-201ENST00000514397 196 ntBASIC2.08□□□□□ -2.08
VAPAQ9P0L0 RNU6-1225P-201ENST00000516336 65 ntBASIC2.08□□□□□ -2.08
VAPAQ9P0L0 RN7SKP31-201ENST00000516354 278 ntBASIC2.08□□□□□ -2.08
VAPAQ9P0L0 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.08□□□□□ -2.08
VAPAQ9P0L0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.08□□□□□ -2.08
VAPAQ9P0L0 OR4K7P-201ENST00000580232 945 ntBASIC2.08□□□□□ -2.08
VAPAQ9P0L0 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.08□□□□□ -2.08
VAPAQ9P0L0 AC024257.5-201ENST00000612739 531 ntBASIC2.08□□□□□ -2.08
VAPAQ9P0L0 AC093591.3-201ENST00000634516 308 ntBASIC2.08□□□□□ -2.08
VAPAQ9P0L0 AC004520.1-201ENST00000608362 1413 ntBASIC2.08□□□□□ -2.08
VAPAQ9P0L0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
VAPAQ9P0L0 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
VAPAQ9P0L0 RNU6-343P-201ENST00000364709 104 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 Y_RNA.333-201ENST00000365274 102 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 SNORA67.4-201ENST00000384688 142 ntBASIC2.07□□□□□ -2.08
VAPAQ9P0L0 MIR221-201ENST00000385135 110 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms