Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 MIR5004-201ENST00000579078 107 ntBASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 RPL23AP78-201ENST00000599928 470 ntBASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 AP003399.1-201ENST00000637534 361 ntBASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 AL137003.2-201ENST00000606924 2538 ntBASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 MTND5P7-201ENST00000413558 1798 ntBASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AC073325.2-201ENST00000339545 159 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 RNA5SP354-201ENST00000391247 136 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 RPL32P35-201ENST00000415214 394 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 ATG3P1-201ENST00000419507 911 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 RAC1P6-201ENST00000423911 575 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AC019097.1-201ENST00000424783 735 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AC137499.1-201ENST00000427602 88 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 DDX3P2-201ENST00000446138 111 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 USP9YP12-201ENST00000450481 570 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 SSXP1-201ENST00000453640 473 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 BX510359.1-201ENST00000456973 237 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 RN7SL432P-201ENST00000484057 298 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AC109486.1-201ENST00000486833 374 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 DSTNP2-201ENST00000504533 515 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AC128657.1-201ENST00000549459 145 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 MRPS36P5-201ENST00000551909 298 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AL158211.1-201ENST00000566763 763 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AC068135.2-201ENST00000569293 1028 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AC005951.1-201ENST00000576706 485 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 MIR5697-201ENST00000578045 78 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 U73023.1-201ENST00000603134 700 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 SRGNP1-201ENST00000603392 451 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AL022161.1-201ENST00000604390 213 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AC012468.1-201ENST00000604888 430 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 RNU6-87P-201ENST00000607561 108 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AC138749.5-201ENST00000611461 208 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AC027807.2-201ENST00000616099 408 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AC116165.2-201ENST00000616705 206 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AC009878.1-201ENST00000621819 340 ntBASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.47□□□□□ -1.85
BLOC1S4Q9NUP1 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.46□□□□□ -1.85
BLOC1S4Q9NUP1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
BLOC1S4Q9NUP1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 FTLP6-201ENST00000355274 422 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 MIR148B-201ENST00000362252 99 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 RNU6-1167P-201ENST00000363227 94 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 SNORA54-201ENST00000384281 123 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 NDUFS5P1-201ENST00000405668 289 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 BTF3L4P3-201ENST00000418879 476 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 RPL7P46-201ENST00000425129 740 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 CETN4P-201ENST00000432407 469 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 FCF1P1-201ENST00000432690 571 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 TRIM60P18-201ENST00000441518 828 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 KATNBL1P6-201ENST00000453433 915 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 RN7SL807P-201ENST00000470923 297 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 RBM43P1-201ENST00000476891 1081 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 AC010486.2-201ENST00000505572 483 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 AC114797.1-201ENST00000514003 728 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 AC026407.1-201ENST00000518369 204 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 AC068657.1-201ENST00000520807 306 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 AC022878.1-201ENST00000530684 149 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 AC105129.3-201ENST00000605455 485 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 AC120349.3-201ENST00000624377 529 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 MIR7153-201ENST00000637758 57 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 MTND4P4-201ENST00000439033 1366 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 API5P2-201ENST00000397055 1498 ntBASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.46□□□□□ -1.86
BLOC1S4Q9NUP1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms