Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC099063.3-201ENST00000642066 185 ntBASIC2.94□□□□□ -1.94
HPS4Q9NQG7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.94□□□□□ -1.94
HPS4Q9NQG7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HPS4Q9NQG7 OR4G2P-202ENST00000641004 1759 ntBASIC2.94□□□□□ -1.94
HPS4Q9NQG7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HPS4Q9NQG7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HPS4Q9NQG7 AC009902.3-201ENST00000606235 2172 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HPS4Q9NQG7 RNA5SP88-201ENST00000365560 109 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
HPS4Q9NQG7 RNU6-754P-201ENST00000391166 107 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 MIR887-201ENST00000401258 79 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 RNA5SP274-201ENST00000410484 108 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 HIGD1AP15-201ENST00000416198 280 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.93□□□□□ -1.94
HPS4Q9NQG7 XKRYP1-201ENST00000423438 492 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.93□□□□□ -1.94
HPS4Q9NQG7 AL445669.1-201ENST00000426743 755 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 AC008850.1-201ENST00000427546 362 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 AL390023.1-201ENST00000428836 262 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 XKRYP2-201ENST00000432915 492 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.93□□□□□ -1.94
HPS4Q9NQG7 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.93□□□□□ -1.94
HPS4Q9NQG7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.93□□□□□ -1.94
HPS4Q9NQG7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.93□□□□□ -1.94
HPS4Q9NQG7 RPL30P5-201ENST00000494923 336 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.93□□□□□ -1.94
HPS4Q9NQG7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.93□□□□□ -1.94
HPS4Q9NQG7 MTND5P4-201ENST00000514978 288 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 RN7SKP287-201ENST00000516546 266 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 AL133271.1-201ENST00000538229 291 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.93□□□□□ -1.94
HPS4Q9NQG7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.93□□□□□ -1.94
HPS4Q9NQG7 AC060771.1-201ENST00000582031 164 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.93□□□□□ -1.94
HPS4Q9NQG7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.93□□□□□ -1.94
HPS4Q9NQG7 AC093424.1-201ENST00000604999 338 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 AC140725.3-201ENST00000616193 880 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 AC009159.2-201ENST00000617603 606 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.93□□□□□ -1.94
HPS4Q9NQG7 AC079597.1-201ENST00000624306 508 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 AC019226.1-201ENST00000625666 515 ntBASIC2.93□□□□□ -1.94
HPS4Q9NQG7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HPS4Q9NQG7 AL355596.1-201ENST00000565399 3996 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
HPS4Q9NQG7 SDAD1P2-201ENST00000441308 2028 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HPS4Q9NQG7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HPS4Q9NQG7 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HPS4Q9NQG7 RNU4-82P-201ENST00000362443 140 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 SNORA23-201ENST00000365128 182 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 RPL19P1-201ENST00000411635 428 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 RAP1BP1-201ENST00000412709 553 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 AL022400.1-201ENST00000423946 935 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.92□□□□□ -1.94
HPS4Q9NQG7 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HPS4Q9NQG7 TAAR7P-201ENST00000436141 242 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 AL591719.1-201ENST00000444669 744 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 AC009237.8-201ENST00000445492 379 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.92□□□□□ -1.94
HPS4Q9NQG7 MTND2P24-201ENST00000453434 806 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 MTCYBP35-201ENST00000503630 1137 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.92□□□□□ -1.94
HPS4Q9NQG7 SCARNA15.2-201ENST00000516409 127 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.92□□□□□ -1.94
HPS4Q9NQG7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.92□□□□□ -1.94
HPS4Q9NQG7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.92□□□□□ -1.94
HPS4Q9NQG7 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.92□□□□□ -1.94
HPS4Q9NQG7 AC022022.2-201ENST00000602989 360 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 AL357094.1-201ENST00000603845 844 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 AC013553.2-201ENST00000604244 589 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.92□□□□□ -1.94
HPS4Q9NQG7 AC069234.5-201ENST00000611056 416 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 AC068880.5-201ENST00000624331 290 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HPS4Q9NQG7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HPS4Q9NQG7 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.92□□□□□ -1.94
HPS4Q9NQG7 DDX10P1-201ENST00000448545 1933 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HPS4Q9NQG7 AL359693.1-201ENST00000614959 2407 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HPS4Q9NQG7 RNU1-112P-201ENST00000364401 164 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.91□□□□□ -1.94
HPS4Q9NQG7 RNU6-1200P-201ENST00000384162 107 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 MIR1305-201ENST00000408300 86 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.91□□□□□ -1.94
HPS4Q9NQG7 BX682237.1-201ENST00000415016 335 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.91□□□□□ -1.94
HPS4Q9NQG7 RPL7L1P10-201ENST00000427790 463 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.91□□□□□ -1.94
HPS4Q9NQG7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.91□□□□□ -1.94
HPS4Q9NQG7 ATG12P2-201ENST00000456830 416 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 AL139824.2-201ENST00000458731 1095 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 AC126389.1-201ENST00000477436 290 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 RN7SL633P-201ENST00000488974 297 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 AC106872.3-201ENST00000495104 446 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 AC135721.1-201ENST00000497954 479 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 AC022447.3-201ENST00000506865 495 ntBASIC2.91□□□□□ -1.94
HPS4Q9NQG7 TTC39CP1-201ENST00000512513 755 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms