Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.35□□□□□ -2.03
UPF3BQ9BZI7 MTCO1P23-201ENST00000415223 1526 ntBASIC2.35□□□□□ -2.03
UPF3BQ9BZI7 ZNF849P-201ENST00000594711 1566 ntBASIC2.35□□□□□ -2.03
UPF3BQ9BZI7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 OR4G11P-202ENST00000642116 1414 ntBASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 RNU6-796P-201ENST00000391086 107 ntBASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 AL139098.1-201ENST00000407291 389 ntBASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 RPL17P12-201ENST00000413391 526 ntBASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 AL590383.1-201ENST00000428602 75 ntBASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 AL512637.2-201ENST00000431287 1256 ntBASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 AC114878.1-201ENST00000441166 358 ntBASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 AL050341.1-201ENST00000447743 313 ntBASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 MTND4LP3-201ENST00000468320 276 ntBASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 AC106872.3-201ENST00000495104 446 ntBASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 MTCYBP17-201ENST00000503579 789 ntBASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 AC104229.1-201ENST00000561364 255 ntBASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 ADAM3B-201ENST00000569937 840 ntBASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 AC135507.1-201ENST00000607214 561 ntBASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 AC245884.12-201ENST00000615364 59 ntBASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.34□□□□□ -2.03
UPF3BQ9BZI7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
UPF3BQ9BZI7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 RNU6-878P-201ENST00000384578 110 ntBASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 MIR583-201ENST00000384846 75 ntBASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 MIR518E-201ENST00000385252 88 ntBASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 RNU2-20P-201ENST00000410425 191 ntBASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 SPA17P1-201ENST00000416656 452 ntBASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 SEPT2P1-201ENST00000419651 180 ntBASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 AL445646.1-201ENST00000431784 216 ntBASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 NDUFA5P7-201ENST00000452914 242 ntBASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 AC107626.1-201ENST00000471084 183 ntBASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 AC109464.2-201ENST00000510242 943 ntBASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 AC022483.1-201ENST00000514020 567 ntBASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 SCARNA17.1-201ENST00000516211 143 ntBASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 SCARNA17.2-201ENST00000516334 143 ntBASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 RNA5SP135-201ENST00000517019 125 ntBASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 NDUFS5P6-201ENST00000529136 295 ntBASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 AC023824.2-201ENST00000566185 400 ntBASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 SCARNA17.4-201ENST00000614296 143 ntBASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 AP005901.5-201ENST00000545779 1796 ntBASIC2.33□□□□□ -2.04
UPF3BQ9BZI7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 HSPE1P11-201ENST00000339579 310 ntBASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 AL355497.1-201ENST00000406262 551 ntBASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 U3.40-201ENST00000408706 208 ntBASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 RNU2-43P-201ENST00000410306 190 ntBASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 AC108667.1-201ENST00000428618 249 ntBASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 RPL36AP21-201ENST00000490372 323 ntBASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 AC011352.3-201ENST00000505162 593 ntBASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 AC025755.1-201ENST00000521306 278 ntBASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 CR383656.7-201ENST00000548164 174 ntBASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 AC067805.1-201ENST00000559344 470 ntBASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 AC093838.1-201ENST00000613014 469 ntBASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 AC090132.2-201ENST00000615881 347 ntBASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 RMST_10.1-201ENST00000616309 154 ntBASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 AC104820.1-201ENST00000624183 307 ntBASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 AL512506.2-201ENST00000624472 458 ntBASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 AC132825.7-201ENST00000638744 335 ntBASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
UPF3BQ9BZI7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 MIR378A-201ENST00000362177 66 ntBASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 RNY1P10-201ENST00000363268 113 ntBASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 AC083799.1-201ENST00000366451 910 ntBASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 RNU4-52P-201ENST00000384209 138 ntBASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 MTCO2P31-201ENST00000402702 684 ntBASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 Z85995.1-201ENST00000415547 335 ntBASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms