Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 HMGB1P49-201ENST00000418882 569 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 C1DP1-201ENST00000426049 402 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.09□□□□□ -2.07
COPS4Q9BT78 SRIP2-201ENST00000428470 166 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.09□□□□□ -2.07
COPS4Q9BT78 Z80107.1-201ENST00000436830 412 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.09□□□□□ -2.07
COPS4Q9BT78 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
COPS4Q9BT78 AL109933.2-201ENST00000452651 260 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 RPL12P25-201ENST00000455592 494 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 AC090255.1-201ENST00000495779 349 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.09□□□□□ -2.07
COPS4Q9BT78 AC105252.1-201ENST00000503089 286 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 COL6A4P2-205ENST00000509855 506 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 AC098591.2-201ENST00000510152 315 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 RNA5SP24-201ENST00000516478 95 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.09□□□□□ -2.07
COPS4Q9BT78 UBTFL10-201ENST00000528532 562 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 AC021269.2-201ENST00000532318 330 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.09□□□□□ -2.07
COPS4Q9BT78 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC2.09□□□□□ -2.07
COPS4Q9BT78 AGGF1P5-201ENST00000567900 919 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 OR4K7P-201ENST00000580232 945 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.09□□□□□ -2.07
COPS4Q9BT78 AL390838.2-201ENST00000602394 274 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 MIR1291-201ENST00000627649 87 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 AC006927.2-201ENST00000639256 389 ntBASIC2.09□□□□□ -2.07
COPS4Q9BT78 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
COPS4Q9BT78 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COPS4Q9BT78 CDR1-202ENST00000625883 1485 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.08□□□□□ -2.08
COPS4Q9BT78 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COPS4Q9BT78 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
COPS4Q9BT78 U3.26-201ENST00000391236 204 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 RPL23AP29-201ENST00000397284 453 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 MIR888-201ENST00000401186 77 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 RPL7P27-201ENST00000403775 720 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 AL591416.1-201ENST00000404015 867 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 U3.40-201ENST00000408706 208 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.08□□□□□ -2.08
COPS4Q9BT78 HMGN2P38-201ENST00000423806 265 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 MTATP6P11-201ENST00000428071 670 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.08□□□□□ -2.08
COPS4Q9BT78 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.08□□□□□ -2.08
COPS4Q9BT78 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.08□□□□□ -2.08
COPS4Q9BT78 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.08□□□□□ -2.08
COPS4Q9BT78 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
COPS4Q9BT78 RPS27P21-201ENST00000486977 252 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 AC079804.2-201ENST00000490376 200 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 HMGB1P28-201ENST00000507778 552 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 MTCYBP16-201ENST00000509187 1129 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.08□□□□□ -2.08
COPS4Q9BT78 AC026436.1-201ENST00000510537 270 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 AC008837.1-201ENST00000511513 412 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 RNA5SP148-201ENST00000516527 94 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 RNU6-714P-201ENST00000516963 103 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 RNA5SP291-201ENST00000517222 105 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.08□□□□□ -2.08
COPS4Q9BT78 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
COPS4Q9BT78 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.08□□□□□ -2.08
COPS4Q9BT78 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.08□□□□□ -2.08
COPS4Q9BT78 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.08□□□□□ -2.08
COPS4Q9BT78 AL359212.1-201ENST00000556608 614 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.08□□□□□ -2.08
COPS4Q9BT78 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.08□□□□□ -2.08
COPS4Q9BT78 AC013562.2-201ENST00000611632 603 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 AC005332.10-201ENST00000612725 619 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 AL445264.1-201ENST00000621719 171 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COPS4Q9BT78 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
COPS4Q9BT78 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
COPS4Q9BT78 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
COPS4Q9BT78 AP005901.5-201ENST00000545779 1796 ntBASIC2.08□□□□□ -2.08
COPS4Q9BT78 AC016717.2-201ENST00000609089 5141 ntBASIC2.07□□□□□ -2.08
COPS4Q9BT78 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COPS4Q9BT78 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.07□□□□□ -2.08
COPS4Q9BT78 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
COPS4Q9BT78 RNA5SP68-201ENST00000363885 119 ntBASIC2.07□□□□□ -2.08
COPS4Q9BT78 SNORA23-201ENST00000365128 182 ntBASIC2.07□□□□□ -2.08
COPS4Q9BT78 RNU6-920P-201ENST00000410926 92 ntBASIC2.07□□□□□ -2.08
COPS4Q9BT78 RN7SKP140-201ENST00000411196 284 ntBASIC2.07□□□□□ -2.08
COPS4Q9BT78 TPMTP3-201ENST00000411928 735 ntBASIC2.07□□□□□ -2.08
COPS4Q9BT78 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
COPS4Q9BT78 AL161449.1-201ENST00000414531 1199 ntBASIC2.07□□□□□ -2.08
COPS4Q9BT78 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.07□□□□□ -2.08
COPS4Q9BT78 AL109913.1-201ENST00000421173 514 ntBASIC2.07□□□□□ -2.08
COPS4Q9BT78 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.07□□□□□ -2.08
COPS4Q9BT78 RPS15AP28-201ENST00000435088 386 ntBASIC2.07□□□□□ -2.08
COPS4Q9BT78 MTCYBP42-201ENST00000444653 1130 ntBASIC2.07□□□□□ -2.08
COPS4Q9BT78 AC108938.1-201ENST00000451204 136 ntBASIC2.07□□□□□ -2.08
COPS4Q9BT78 ANKRD26P4-201ENST00000455755 950 ntBASIC2.07□□□□□ -2.08
COPS4Q9BT78 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.07□□□□□ -2.08
COPS4Q9BT78 RPL26P9-201ENST00000457466 433 ntBASIC2.07□□□□□ -2.08
COPS4Q9BT78 snoU13.8-201ENST00000458890 104 ntBASIC2.07□□□□□ -2.08
COPS4Q9BT78 RPL30P9-201ENST00000465586 330 ntBASIC2.07□□□□□ -2.08
COPS4Q9BT78 AC004263.1-201ENST00000479327 332 ntBASIC2.07□□□□□ -2.08
COPS4Q9BT78 AC022447.1-201ENST00000515358 464 ntBASIC2.07□□□□□ -2.08
COPS4Q9BT78 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.07□□□□□ -2.08
COPS4Q9BT78 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms