Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USB1Q9BQ65 AL391361.1-201ENST00000405580 489 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 ELOCP19-201ENST00000411919 318 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 HMGA1P8-201ENST00000414130 321 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.35□□□□□ -1.55
USB1Q9BQ65 AL512844.2-201ENST00000433990 593 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USB1Q9BQ65 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
USB1Q9BQ65 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.35□□□□□ -1.55
USB1Q9BQ65 AL137159.1-201ENST00000452808 512 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 AC144530.1-201ENST00000452862 555 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.35□□□□□ -1.55
USB1Q9BQ65 ACA64.1-201ENST00000459171 127 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 RN7SL221P-201ENST00000466190 281 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 RNU6-1256P-201ENST00000516539 103 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 RNA5SP271-201ENST00000516700 88 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 RNA5SP165-201ENST00000517142 115 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.35□□□□□ -1.55
USB1Q9BQ65 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.35□□□□□ -1.55
USB1Q9BQ65 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.35□□□□□ -1.55
USB1Q9BQ65 AC079905.1-201ENST00000549280 475 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.35□□□□□ -1.55
USB1Q9BQ65 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.35□□□□□ -1.55
USB1Q9BQ65 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.35□□□□□ -1.55
USB1Q9BQ65 AC068768.2-201ENST00000602352 343 ntBASIC5.35□□□□□ -1.55
USB1Q9BQ65 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USB1Q9BQ65 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.35□□□□□ -1.55
USB1Q9BQ65 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
USB1Q9BQ65 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
USB1Q9BQ65 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USB1Q9BQ65 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
USB1Q9BQ65 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
USB1Q9BQ65 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
USB1Q9BQ65 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
USB1Q9BQ65 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
USB1Q9BQ65 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.34□□□□□ -1.55
USB1Q9BQ65 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
USB1Q9BQ65 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.34□□□□□ -1.55
USB1Q9BQ65 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
USB1Q9BQ65 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
USB1Q9BQ65 FTLP6-201ENST00000355274 422 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 RNU4-80P-201ENST00000363200 141 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 RNA5SP435-201ENST00000364044 108 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 SNORD116-14-201ENST00000383894 92 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 SNORD116-17-201ENST00000383929 92 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 SNORD116-15-201ENST00000384445 92 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 SNORD116-20-201ENST00000384529 92 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 SNORD116-19-201ENST00000384729 92 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 RNU6-239P-201ENST00000390990 99 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 AC016739.1-201ENST00000405359 345 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.34□□□□□ -1.55
USB1Q9BQ65 AL138785.1-201ENST00000425821 331 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 AL590399.2-201ENST00000427536 309 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.34□□□□□ -1.55
USB1Q9BQ65 AC023141.3-201ENST00000436698 278 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 Z82210.1-201ENST00000440037 231 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.34□□□□□ -1.55
USB1Q9BQ65 RN7SL352P-201ENST00000466002 277 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 AL122020.1-201ENST00000472287 459 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.34□□□□□ -1.55
USB1Q9BQ65 MLLT10P2-201ENST00000506434 249 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 SNORD116-26-201ENST00000516006 96 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.34□□□□□ -1.55
USB1Q9BQ65 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.34□□□□□ -1.55
USB1Q9BQ65 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.34□□□□□ -1.55
USB1Q9BQ65 AC012254.3-201ENST00000591183 2117 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
USB1Q9BQ65 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
USB1Q9BQ65 AL162431.4-201ENST00000604674 411 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 AL590392.1-201ENST00000604960 446 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 RN7SL261P-201ENST00000613441 282 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 AC092593.1-201ENST00000515413 1815 ntBASIC5.34□□□□□ -1.55
USB1Q9BQ65 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
USB1Q9BQ65 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.56
USB1Q9BQ65 GVINP1-202ENST00000531871 7271 ntBASIC5.34□□□□□ -1.56
USB1Q9BQ65 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.34□□□□□ -1.56
USB1Q9BQ65 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.34□□□□□ -1.56
USB1Q9BQ65 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.34□□□□□ -1.56
USB1Q9BQ65 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
USB1Q9BQ65 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
USB1Q9BQ65 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.33□□□□□ -1.56
USB1Q9BQ65 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.33□□□□□ -1.56
USB1Q9BQ65 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.33□□□□□ -1.56
USB1Q9BQ65 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
USB1Q9BQ65 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
USB1Q9BQ65 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.33□□□□□ -1.56
USB1Q9BQ65 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
USB1Q9BQ65 RNU6-137P-201ENST00000363680 108 ntBASIC5.33□□□□□ -1.56
USB1Q9BQ65 U8.10-201ENST00000384260 133 ntBASIC5.33□□□□□ -1.56
USB1Q9BQ65 MIR130B-202ENST00000385018 82 ntBASIC5.33□□□□□ -1.56
USB1Q9BQ65 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.33□□□□□ -1.56
USB1Q9BQ65 AL035660.1-201ENST00000422041 222 ntBASIC5.33□□□□□ -1.56
USB1Q9BQ65 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.33□□□□□ -1.56
USB1Q9BQ65 AC098614.2-201ENST00000426040 255 ntBASIC5.33□□□□□ -1.56
USB1Q9BQ65 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.33□□□□□ -1.56
USB1Q9BQ65 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.33□□□□□ -1.56
USB1Q9BQ65 AC091179.1-201ENST00000461606 579 ntBASIC5.33□□□□□ -1.56
USB1Q9BQ65 AC091874.1-201ENST00000511402 339 ntBASIC5.33□□□□□ -1.56
USB1Q9BQ65 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms