Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AC022336.2-201ENST00000568966 2538 ntBASIC2.14□□□□□ -2.07
VAT1Q99536 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
VAT1Q99536 MTCO1P9-201ENST00000505577 1534 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 RNU6-217P-201ENST00000384164 104 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 RPL17P50-201ENST00000396131 546 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 RNA5SP80-201ENST00000410475 111 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
VAT1Q99536 RPS7P9-201ENST00000414704 586 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.13□□□□□ -2.07
VAT1Q99536 MTCO2P5-201ENST00000422621 426 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 CBWD4P-201ENST00000445695 655 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.13□□□□□ -2.07
VAT1Q99536 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 AC022447.3-201ENST00000506865 495 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.13□□□□□ -2.07
VAT1Q99536 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.13□□□□□ -2.07
VAT1Q99536 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.13□□□□□ -2.07
VAT1Q99536 AC087465.1-201ENST00000560574 245 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 AC090615.1-201ENST00000577519 154 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 MIR5708-201ENST00000579723 85 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 SNORD53-201ENST00000579969 78 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 MIR4658-201ENST00000584344 65 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 AC011451.2-201ENST00000604303 598 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 AL021368.1-201ENST00000607490 540 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 AL603758.1-201ENST00000618654 241 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 AC006927.2-201ENST00000639256 389 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
VAT1Q99536 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.13□□□□□ -2.07
VAT1Q99536 AC005539.1-201ENST00000443768 1479 ntBASIC2.13□□□□□ -2.07
VAT1Q99536 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.13□□□□□ -2.07
VAT1Q99536 CCT4P2-201ENST00000233836 1548 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 AL356473.1-201ENST00000406203 1408 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VAT1Q99536 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VAT1Q99536 RNU6-28P-201ENST00000362378 107 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 RNU5B-4P-201ENST00000363508 111 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 RNU6-236P-201ENST00000363886 106 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 RPL7P27-201ENST00000403775 720 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 RNA5SP425-201ENST00000410336 112 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 RNU2-42P-201ENST00000410697 113 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 MORF4L1P6-201ENST00000418771 268 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.12□□□□□ -2.07
VAT1Q99536 AC008850.1-201ENST00000427546 362 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.12□□□□□ -2.07
VAT1Q99536 Z82210.1-201ENST00000440037 231 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.12□□□□□ -2.07
VAT1Q99536 AC233279.1-201ENST00000455300 423 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 MRPS17P3-201ENST00000465453 385 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.12□□□□□ -2.07
VAT1Q99536 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.12□□□□□ -2.07
VAT1Q99536 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.12□□□□□ -2.07
VAT1Q99536 AC119751.5-201ENST00000514077 770 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.12□□□□□ -2.07
VAT1Q99536 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.12□□□□□ -2.07
VAT1Q99536 OR4K7P-201ENST00000580232 945 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.12□□□□□ -2.07
VAT1Q99536 AC120053.1-201ENST00000607706 736 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 AC243773.3-201ENST00000613270 256 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.12□□□□□ -2.07
VAT1Q99536 AC109454.4-201ENST00000623411 649 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 MIR203B-201ENST00000636080 86 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 MIR219B-201ENST00000637023 88 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 ELF2P3-201ENST00000445099 1506 ntBASIC2.12□□□□□ -2.07
VAT1Q99536 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
VAT1Q99536 AC092881.1-201ENST00000638218 2733 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 MIR449A-201ENST00000362113 91 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 RN7SKP226-201ENST00000364912 300 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 AL109755.1-201ENST00000401791 649 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.11□□□□□ -2.07
VAT1Q99536 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.11□□□□□ -2.07
VAT1Q99536 C1DP1-201ENST00000426049 402 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.11□□□□□ -2.07
VAT1Q99536 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.11□□□□□ -2.07
VAT1Q99536 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.11□□□□□ -2.07
VAT1Q99536 AL021397.1-201ENST00000451806 248 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.11□□□□□ -2.07
VAT1Q99536 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.11□□□□□ -2.07
VAT1Q99536 FAM172BP-201ENST00000487497 1089 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 AC114981.1-201ENST00000503897 678 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.11□□□□□ -2.07
VAT1Q99536 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.11□□□□□ -2.07
VAT1Q99536 AC114786.4-201ENST00000508771 728 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 AC008837.1-201ENST00000511513 412 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 AC114797.1-201ENST00000514003 728 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 SCARNA17.1-201ENST00000516211 143 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 SCARNA17.2-201ENST00000516334 143 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.11□□□□□ -2.07
VAT1Q99536 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.11□□□□□ -2.07
VAT1Q99536 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.11□□□□□ -2.07
VAT1Q99536 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.11□□□□□ -2.07
VAT1Q99536 AC009314.1-201ENST00000603871 304 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 AL161729.4-201ENST00000604650 476 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 AC069304.2-201ENST00000605154 435 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 BNIP3P19-201ENST00000605397 577 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 MIR6840-201ENST00000611937 71 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 SCARNA17.4-201ENST00000614296 143 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 HMGB1P24-202ENST00000615653 685 ntBASIC2.11□□□□□ -2.07
VAT1Q99536 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.11□□□□□ -2.07
VAT1Q99536 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
VAT1Q99536 AC004944.1-201ENST00000517807 3059 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms