Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PTP4A1Q93096 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
PTP4A1Q93096 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PTP4A1Q93096 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PTP4A1Q93096 UBE2L2-201ENST00000254302 429 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PTP4A1Q93096 RNU1-73P-201ENST00000383971 164 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 MIR7-3-201ENST00000384898 110 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 RNU6-750P-201ENST00000390946 107 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 AC023141.4-201ENST00000412031 328 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 BX682237.1-201ENST00000415016 335 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.89□□□□□ -1.95
PTP4A1Q93096 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.89□□□□□ -1.95
PTP4A1Q93096 OR2AS1P-201ENST00000427827 319 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 FCF1P1-201ENST00000432690 571 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 AC010153.1-201ENST00000432862 727 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.89□□□□□ -1.95
PTP4A1Q93096 AC005019.1-201ENST00000436455 431 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 RPL22P17-201ENST00000438729 315 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 RPS15AP7-201ENST00000439294 405 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 MTATP6P30-201ENST00000443540 664 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.89□□□□□ -1.95
PTP4A1Q93096 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.89□□□□□ -1.95
PTP4A1Q93096 OSTCP8-201ENST00000445117 448 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 AC016696.1-201ENST00000446949 318 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.89□□□□□ -1.95
PTP4A1Q93096 RPL21P10-201ENST00000463521 490 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 LINC00888-204ENST00000487386 421 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.89□□□□□ -1.95
PTP4A1Q93096 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.89□□□□□ -1.95
PTP4A1Q93096 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.89□□□□□ -1.95
PTP4A1Q93096 AC116347.2-201ENST00000514912 523 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.89□□□□□ -1.95
PTP4A1Q93096 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 RPPH1-2P-201ENST00000516688 293 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 RNU6-143P-201ENST00000516942 93 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 SCARNA11.3-201ENST00000517276 130 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.89□□□□□ -1.95
PTP4A1Q93096 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.89□□□□□ -1.95
PTP4A1Q93096 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.89□□□□□ -1.95
PTP4A1Q93096 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.89□□□□□ -1.95
PTP4A1Q93096 NCAPGP2-201ENST00000557911 754 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 MIR4444-1-201ENST00000581696 74 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 MIR4444-2-201ENST00000584390 74 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.89□□□□□ -1.95
PTP4A1Q93096 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.89□□□□□ -1.95
PTP4A1Q93096 AC121334.2-201ENST00000605387 271 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 AC025594.3-201ENST00000613068 790 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 MIR6075-201ENST00000620782 95 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.89□□□□□ -1.95
PTP4A1Q93096 AP002791.1-201ENST00000623291 381 ntBASIC2.89□□□□□ -1.95
PTP4A1Q93096 AL353743.1-202ENST00000431724 1695 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
PTP4A1Q93096 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
PTP4A1Q93096 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
PTP4A1Q93096 RNU6-1214P-201ENST00000363650 109 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 RNU2-49P-201ENST00000410666 184 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.88□□□□□ -1.95
PTP4A1Q93096 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 BPY2DP-201ENST00000422208 265 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 RAC1P6-201ENST00000423911 575 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 AL512649.1-201ENST00000428997 581 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.88□□□□□ -1.95
PTP4A1Q93096 RPL36AP53-201ENST00000432891 316 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.88□□□□□ -1.95
PTP4A1Q93096 AL606662.1-201ENST00000445763 553 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 NANOGNBP1-201ENST00000448444 480 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.88□□□□□ -1.95
PTP4A1Q93096 OR6C5P-201ENST00000452388 923 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 MTCO1P42-201ENST00000457379 726 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 RNU6-953P-201ENST00000459154 107 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PTP4A1Q93096 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 RN7SKP265-201ENST00000516448 223 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 RNU6-201P-201ENST00000517100 61 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.88□□□□□ -1.95
PTP4A1Q93096 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.88□□□□□ -1.95
PTP4A1Q93096 AC007458.1-201ENST00000542812 373 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 RPS3AP4-201ENST00000555161 764 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 PCMTD1P2-201ENST00000565017 355 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 MIR1254-2-201ENST00000579553 63 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 MIR3146-201ENST00000580367 79 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.88□□□□□ -1.95
PTP4A1Q93096 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.88□□□□□ -1.95
PTP4A1Q93096 AL162713.1-201ENST00000604480 262 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 AC012468.1-201ENST00000604888 430 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 AC018714.1-201ENST00000605028 208 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 AC135507.1-201ENST00000607214 561 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 AC011939.3-201ENST00000613686 466 ntBASIC2.88□□□□□ -1.95
PTP4A1Q93096 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
PTP4A1Q93096 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PTP4A1Q93096 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.88□□□□□ -1.95
PTP4A1Q93096 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PTP4A1Q93096 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 Y_RNA.46-201ENST00000362695 102 ntBASIC2.87□□□□□ -1.95
PTP4A1Q93096 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms