Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNIP1Q8TAD8 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 RNU6-275P-201ENST00000364910 107 ntBASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 RNA5SP213-201ENST00000391031 106 ntBASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 AL354868.1-201ENST00000417077 482 ntBASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 SRSF1P1-201ENST00000424058 520 ntBASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 AC108075.1-201ENST00000424692 529 ntBASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 AC009220.1-201ENST00000451614 275 ntBASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 SNRPCP2-201ENST00000504370 475 ntBASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 AP004242.1-201ENST00000533701 349 ntBASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 AL157871.3-201ENST00000557231 293 ntBASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 AC006116.3-201ENST00000592968 361 ntBASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 AL139395.1-201ENST00000603662 160 ntBASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 AC005046.1-201ENST00000608515 625 ntBASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 AC090607.5-201ENST00000615692 224 ntBASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 AOX3P-204ENST00000491025 2107 ntBASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 SAGE4P-201ENST00000442271 3381 ntBASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNIP1Q8TAD8 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 AC093671.1-201ENST00000624981 2929 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 AL034546.1-201ENST00000623740 3693 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 ZNF204P-201ENST00000416749 2397 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 FTLP6-201ENST00000355274 422 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 U3.2-201ENST00000362981 210 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 RNU6-961P-201ENST00000363893 105 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 RNU4-17P-201ENST00000365598 141 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 MIR141-201ENST00000384975 95 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 ENSAP1-201ENST00000392855 326 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 RPL21P67-201ENST00000402896 478 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 AP000907.1-201ENST00000428428 510 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 COX6B1P7-201ENST00000430845 235 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 RPL23AP58-201ENST00000440453 469 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 RPS11P7-201ENST00000442125 465 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 AC022431.1-201ENST00000450941 438 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 AL389915.2-201ENST00000454576 441 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 RNU6-168P-201ENST00000516189 101 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 AC005476.1-201ENST00000554427 397 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 DNAJC19P2-201ENST00000593340 302 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 AC000068.2-201ENST00000608816 460 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 AC011603.4-201ENST00000611325 277 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 MIR3658-201ENST00000636291 56 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 AC092079.1-201ENST00000558620 1985 ntBASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.34□□□□□ -1.55
SNIP1Q8TAD8 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
SNIP1Q8TAD8 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SNIP1Q8TAD8 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
SNIP1Q8TAD8 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SNIP1Q8TAD8 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
SNIP1Q8TAD8 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.33□□□□□ -1.56
SNIP1Q8TAD8 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.33□□□□□ -1.56
SNIP1Q8TAD8 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SNIP1Q8TAD8 AC110373.1-201ENST00000505994 3505 ntBASIC5.33□□□□□ -1.56
SNIP1Q8TAD8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNIP1Q8TAD8 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.33□□□□□ -1.56
SNIP1Q8TAD8 UBE2L2-201ENST00000254302 429 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms