Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP38Q8NB14 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP38Q8NB14 AL672296.1-201ENST00000427780 2158 ntBASIC3.78□□□□□ -1.8
USP38Q8NB14 DEFB108F-201ENST00000344638 222 ntBASIC3.78□□□□□ -1.8
USP38Q8NB14 RNU4-24P-201ENST00000364565 139 ntBASIC3.78□□□□□ -1.8
USP38Q8NB14 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.78□□□□□ -1.8
USP38Q8NB14 SNORA75-201ENST00000384158 137 ntBASIC3.78□□□□□ -1.8
USP38Q8NB14 TXNP7-201ENST00000406296 293 ntBASIC3.78□□□□□ -1.8
USP38Q8NB14 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.78□□□□□ -1.8
USP38Q8NB14 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.78□□□□□ -1.8
USP38Q8NB14 HMGB3P8-201ENST00000449709 577 ntBASIC3.78□□□□□ -1.8
USP38Q8NB14 MTCO2P18-201ENST00000457151 658 ntBASIC3.78□□□□□ -1.8
USP38Q8NB14 AC006445.1-201ENST00000491925 405 ntBASIC3.78□□□□□ -1.8
USP38Q8NB14 AC010587.1-201ENST00000505809 469 ntBASIC3.78□□□□□ -1.8
USP38Q8NB14 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.78□□□□□ -1.8
USP38Q8NB14 RNU2-46P-201ENST00000517038 113 ntBASIC3.78□□□□□ -1.8
USP38Q8NB14 RNU6-64P-201ENST00000517119 105 ntBASIC3.78□□□□□ -1.8
USP38Q8NB14 AP001804.3-201ENST00000525146 880 ntBASIC3.78□□□□□ -1.8
USP38Q8NB14 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.78□□□□□ -1.8
USP38Q8NB14 OR4H12P-201ENST00000556269 907 ntBASIC3.78□□□□□ -1.8
USP38Q8NB14 AC103987.3-201ENST00000582071 292 ntBASIC3.78□□□□□ -1.8
USP38Q8NB14 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.78□□□□□ -1.8
USP38Q8NB14 AP001029.3-201ENST00000588063 596 ntBASIC3.78□□□□□ -1.8
USP38Q8NB14 ATP5A1P2-202ENST00000616464 443 ntBASIC3.78□□□□□ -1.8
USP38Q8NB14 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
USP38Q8NB14 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.78□□□□□ -1.8
USP38Q8NB14 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.78□□□□□ -1.8
USP38Q8NB14 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
USP38Q8NB14 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP38Q8NB14 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP38Q8NB14 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.77□□□□□ -1.81
USP38Q8NB14 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP38Q8NB14 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP38Q8NB14 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
USP38Q8NB14 OR5H15-201ENST00000383696 930 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 DEFB108C-201ENST00000400154 252 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 AC127391.1-201ENST00000411737 98 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.77□□□□□ -1.81
USP38Q8NB14 CDK8P2-201ENST00000415020 547 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 MORF4L1P6-201ENST00000418771 268 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.77□□□□□ -1.81
USP38Q8NB14 DLGAP5P1-201ENST00000430307 464 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.77□□□□□ -1.81
USP38Q8NB14 ARPC3P1-201ENST00000437218 533 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 AC006028.1-201ENST00000438379 402 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 AC073614.1-201ENST00000438690 650 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.77□□□□□ -1.81
USP38Q8NB14 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.77□□□□□ -1.81
USP38Q8NB14 PGBD4P3-201ENST00000440731 581 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.77□□□□□ -1.81
USP38Q8NB14 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.77□□□□□ -1.81
USP38Q8NB14 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.77□□□□□ -1.81
USP38Q8NB14 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.77□□□□□ -1.81
USP38Q8NB14 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.77□□□□□ -1.81
USP38Q8NB14 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.77□□□□□ -1.81
USP38Q8NB14 IGHV3-76-201ENST00000522465 295 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.77□□□□□ -1.81
USP38Q8NB14 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.77□□□□□ -1.81
USP38Q8NB14 AC026333.2-201ENST00000542164 106 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 AC135279.1-201ENST00000543493 504 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 AC022080.3-201ENST00000544433 482 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 SYF2P1-201ENST00000550658 413 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.77□□□□□ -1.81
USP38Q8NB14 AC055876.1-202ENST00000567053 138 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.77□□□□□ -1.81
USP38Q8NB14 MIR3682-201ENST00000581338 84 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.77□□□□□ -1.81
USP38Q8NB14 AC105224.1-201ENST00000587055 421 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 AP000860.1-201ENST00000605250 559 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.77□□□□□ -1.81
USP38Q8NB14 AP000254.1-201ENST00000609934 520 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 AL133173.2-201ENST00000614270 90 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 AC139792.2-201ENST00000624218 587 ntBASIC3.77□□□□□ -1.81
USP38Q8NB14 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
USP38Q8NB14 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP38Q8NB14 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP38Q8NB14 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
USP38Q8NB14 PWAR6-201ENST00000552334 4618 ntBASIC3.76□□□□□ -1.81
USP38Q8NB14 OR1S2-201ENST00000302592 978 ntBASIC3.76□□□□□ -1.81
USP38Q8NB14 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.76□□□□□ -1.81
USP38Q8NB14 MIR422A-201ENST00000362286 90 ntBASIC3.76□□□□□ -1.81
USP38Q8NB14 Y_RNA.194-201ENST00000363985 102 ntBASIC3.76□□□□□ -1.81
USP38Q8NB14 RNU6-348P-201ENST00000384386 107 ntBASIC3.76□□□□□ -1.81
USP38Q8NB14 RNU2-62P-201ENST00000410868 191 ntBASIC3.76□□□□□ -1.81
USP38Q8NB14 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.76□□□□□ -1.81
USP38Q8NB14 YPEL5P1-201ENST00000419731 367 ntBASIC3.76□□□□□ -1.81
USP38Q8NB14 RPL31P12-201ENST00000422587 358 ntBASIC3.76□□□□□ -1.81
USP38Q8NB14 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.76□□□□□ -1.81
USP38Q8NB14 AC007283.2-201ENST00000424739 197 ntBASIC3.76□□□□□ -1.81
USP38Q8NB14 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.76□□□□□ -1.81
USP38Q8NB14 BX679664.1-201ENST00000434429 253 ntBASIC3.76□□□□□ -1.81
USP38Q8NB14 HMGN2P20-201ENST00000437531 273 ntBASIC3.76□□□□□ -1.81
USP38Q8NB14 GAPDHP17-201ENST00000449858 1001 ntBASIC3.76□□□□□ -1.81
USP38Q8NB14 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.76□□□□□ -1.81
USP38Q8NB14 AC006539.3-201ENST00000454258 129 ntBASIC3.76□□□□□ -1.81
USP38Q8NB14 HMGN2P16-201ENST00000456802 261 ntBASIC3.76□□□□□ -1.81
USP38Q8NB14 KLF3P2-201ENST00000465138 268 ntBASIC3.76□□□□□ -1.81
USP38Q8NB14 RPL23AP14-201ENST00000468281 468 ntBASIC3.76□□□□□ -1.81
USP38Q8NB14 RPS23P3-201ENST00000470993 430 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms