Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC093913.1-201ENST00000614178 329 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 MIR4727-201ENST00000622232 55 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AC134503.1-201ENST00000633048 54 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 MIR6715B-201ENST00000637172 77 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 AL592437.2-201ENST00000421655 2434 ntBASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A3Q8N4M1 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 AC011266.1-201ENST00000624119 3569 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 Y_RNA.167-201ENST00000363735 109 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 SNORA63C-201ENST00000364578 129 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 Y_RNA.315-201ENST00000365117 102 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 RNU6-903P-201ENST00000391270 109 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 RN7SKP177-201ENST00000410567 355 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 BX323014.1-201ENST00000412876 237 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 OR1AA1P-201ENST00000419597 916 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 HLA-N-201ENST00000437516 135 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 AC105402.2-201ENST00000438503 358 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 CYCSP35-201ENST00000451978 304 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 RPS29P15-201ENST00000458329 171 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 AC126389.1-201ENST00000477436 290 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 KLHL2P1-201ENST00000508691 521 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 RN7SKP18-201ENST00000516005 275 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 COX6CP3-201ENST00000580869 223 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 POLR3GP2-201ENST00000588366 668 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 AC116312.1-201ENST00000606841 314 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 AC064801.1-201ENST00000612025 407 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 AP001486.3-201ENST00000615334 372 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 AC079684.1-201ENST00000621405 437 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 MAPK10-253ENST00000641010 4072 ntBASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A3Q8N4M1 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 PRO1804-201ENST00000623780 2050 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 Y_RNA.111-201ENST00000363248 100 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 RNU6-43P-201ENST00000384302 107 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 SNORD116-29-201ENST00000384516 83 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 AL359634.1-202ENST00000404721 284 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 NDUFB4P4-201ENST00000404822 243 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 MIR548P-201ENST00000408336 84 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 RNU2-62P-201ENST00000410868 191 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 Z92545.1-201ENST00000411782 234 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 AL451054.2-201ENST00000420896 202 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 OR2AS1P-201ENST00000427827 319 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 AC236972.2-201ENST00000434979 310 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 AC239809.1-201ENST00000450470 217 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 AC108059.3-201ENST00000456388 214 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 RNU7-180P-201ENST00000459240 63 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 RPS4XP10-201ENST00000465034 731 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 RPL23AP11-201ENST00000475260 469 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 RN7SL271P-201ENST00000487601 295 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms