Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 RNU6-989P-201ENST00000362756 107 ntBASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 SNORA2.3-201ENST00000383920 135 ntBASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 U3.35-201ENST00000408405 208 ntBASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 RN7SKP114-201ENST00000410327 279 ntBASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 EI24P1-201ENST00000416584 867 ntBASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 BX323845.1-201ENST00000432417 179 ntBASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 AC092573.2-201ENST00000434546 243 ntBASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 snoU13.1-201ENST00000459157 104 ntBASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 SNORA31.3-201ENST00000516029 96 ntBASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 RNU6-346P-201ENST00000516288 111 ntBASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 RPL23AP53-201ENST00000521854 457 ntBASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 MIR5696-201ENST00000578474 85 ntBASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 MIR4300-201ENST00000581016 96 ntBASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 MIR3667-201ENST00000581025 74 ntBASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 THAP12P5-201ENST00000405864 2275 ntBASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SH3RF1Q7Z6J0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.71□□□□□ -1.49
SH3RF1Q7Z6J0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.71□□□□□ -1.49
SH3RF1Q7Z6J0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 RNU6-1179P-201ENST00000384667 107 ntBASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 AL353621.1-201ENST00000418219 243 ntBASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 RPS17P2-201ENST00000461663 408 ntBASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 AC010683.1-201ENST00000473673 378 ntBASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 RN7SL244P-201ENST00000493405 297 ntBASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 COX6B1P5-201ENST00000509843 249 ntBASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 AF186190.1-201ENST00000517470 480 ntBASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 RLIMP1-201ENST00000339626 1680 ntBASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 AL731532.2-201ENST00000623542 1953 ntBASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
SH3RF1Q7Z6J0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 Y_RNA.16-201ENST00000362421 102 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 MIR135A2-201ENST00000384854 100 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 CTSL3P-202ENST00000412179 788 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 CYCSP33-201ENST00000414485 327 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 AC099336.2-201ENST00000422457 254 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 ELOCP18-201ENST00000434209 337 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 USP9YP7-201ENST00000436723 430 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 AL450023.3-201ENST00000440592 271 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 USP9YP32-201ENST00000452432 430 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 ISCUP1-201ENST00000454451 448 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 AC099560.2-201ENST00000457554 255 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 PPIAP21-201ENST00000464473 501 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 RPL30P10-201ENST00000488148 337 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 RNU7-200P-201ENST00000516105 62 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 AC134698.5-201ENST00000519444 336 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms