Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 RNU6-946P-201ENST00000383878 107 ntBASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 Y_RNA.554-201ENST00000384672 102 ntBASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 RNVU1-14-201ENST00000384770 164 ntBASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 MIR454-201ENST00000390180 115 ntBASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 U3.42-201ENST00000408746 214 ntBASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 SDCBPP3-201ENST00000419629 891 ntBASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 NEFMP1-201ENST00000443423 1006 ntBASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 HMGB3P15-201ENST00000507326 574 ntBASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 AC011352.1-201ENST00000512300 793 ntBASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 AC007619.2-201ENST00000605743 379 ntBASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 U6atac.1-201ENST00000616025 117 ntBASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 AC093648.1-201ENST00000623546 606 ntBASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 ZNF680P1-201ENST00000436625 1469 ntBASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC149Q6ZUS6 MTND5P17-201ENST00000418405 1603 ntBASIC4.03□□□□□ -1.77
CCDC149Q6ZUS6 AC090740.1-201ENST00000623193 2262 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 RNU6-1085P-201ENST00000363576 107 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 Y_RNA.409-201ENST00000383990 98 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 Y_RNA.481-201ENST00000384373 102 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 RNU6-606P-201ENST00000384721 111 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 MIR493-201ENST00000385254 89 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 MIR548F1-201ENST00000408667 84 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 RNU2-9P-201ENST00000410194 145 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 Z92545.1-201ENST00000411782 234 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 HMGB3P20-201ENST00000417997 600 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 USP9YP18-201ENST00000425912 695 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 AL590383.1-201ENST00000428602 75 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 AL159987.2-201ENST00000432754 307 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 DDX3P2-201ENST00000446138 111 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 ARL2BPP6-201ENST00000512757 439 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 RNU1-61P-201ENST00000516107 151 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 MTND4LP26-201ENST00000518144 282 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 AP001804.3-201ENST00000525146 880 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 OR5BN1P-201ENST00000532955 829 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 AL512310.1-201ENST00000548639 172 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 SYF2P1-201ENST00000550658 413 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 HMGB1P33-201ENST00000563485 527 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 AC024619.4-201ENST00000580924 316 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 MIR3922-201ENST00000585192 84 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 AC174048.1-201ENST00000603389 144 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 AC007363.1-201ENST00000604736 620 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 AC110741.2-201ENST00000605278 268 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 AL365204.3-201ENST00000612448 685 ntBASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC149Q6ZUS6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC149Q6ZUS6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC149Q6ZUS6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC149Q6ZUS6 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CCDC149Q6ZUS6 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC149Q6ZUS6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC149Q6ZUS6 RNU4-48P-201ENST00000365559 182 ntBASIC4.01□□□□□ -1.77
CCDC149Q6ZUS6 Y_RNA.372-201ENST00000365599 102 ntBASIC4.01□□□□□ -1.77
CCDC149Q6ZUS6 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC149Q6ZUS6 RNU6-14P-201ENST00000384630 106 ntBASIC4.01□□□□□ -1.77
CCDC149Q6ZUS6 RNU6-817P-201ENST00000391083 104 ntBASIC4.01□□□□□ -1.77
CCDC149Q6ZUS6 AL590002.1-201ENST00000406554 418 ntBASIC4.01□□□□□ -1.77
CCDC149Q6ZUS6 Z85995.1-201ENST00000415547 335 ntBASIC4.01□□□□□ -1.77
CCDC149Q6ZUS6 AC114491.1-201ENST00000416095 246 ntBASIC4.01□□□□□ -1.77
CCDC149Q6ZUS6 TAAR7P-201ENST00000436141 242 ntBASIC4.01□□□□□ -1.77
CCDC149Q6ZUS6 UBE2V1P8-201ENST00000437166 265 ntBASIC4.01□□□□□ -1.77
CCDC149Q6ZUS6 CBWD4P-201ENST00000445695 655 ntBASIC4.01□□□□□ -1.77
CCDC149Q6ZUS6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms