Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 FGF7P2-201ENST00000332473 296 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 RNU6-223P-201ENST00000362830 107 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 RNU6-348P-201ENST00000384386 107 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AL136116.1-201ENST00000403591 381 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 FAT1P1-201ENST00000406588 507 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 RN7SKP220-201ENST00000410611 288 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 EEF1A1P41-201ENST00000414667 207 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 UBE2FP1-201ENST00000416536 447 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 ARF4P2-201ENST00000430209 526 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 USP9YP14-201ENST00000430663 563 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 TXNP1-201ENST00000441872 371 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AL162389.1-201ENST00000449233 177 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 TPT1P7-201ENST00000458300 517 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 RPS4XP2-201ENST00000458402 793 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 RNA5SP269-201ENST00000459032 137 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 HMGN2P13-201ENST00000476476 274 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AC112204.1-201ENST00000502591 103 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 Y_RNA.655-201ENST00000515919 96 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 RNA5SP356-201ENST00000515972 94 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AP003181.2-201ENST00000528941 181 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AP003122.4-201ENST00000530980 758 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AP000873.5-201ENST00000533906 236 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 MTND1P15-201ENST00000579262 949 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 SEPT7P9-203ENST00000604116 343 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AC087752.4-201ENST00000605911 462 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 TUG1_2.1-201ENST00000614234 87 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AC092656.1-203ENST00000624134 423 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 TEX21P-201ENST00000447107 1476 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 MIR449A-201ENST00000362113 91 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 OR5H15-201ENST00000383696 930 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 SNORA54-201ENST00000384281 123 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 SNORA36C-201ENST00000384289 132 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 SNORA40.3-201ENST00000390964 122 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 RPL7P25-201ENST00000404151 721 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 TMEM167AP1-201ENST00000423409 219 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 CST9LP2-201ENST00000437612 320 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AL049734.2-201ENST00000441066 616 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AC016696.1-201ENST00000446949 318 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 RNU7-59P-201ENST00000459101 61 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AL049714.1-201ENST00000466686 347 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 RPS4XP22-201ENST00000480755 780 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AL049874.1-201ENST00000489560 388 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 RPS15AP36-201ENST00000492022 382 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AC114967.1-201ENST00000504890 259 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 RNU6-840P-201ENST00000517275 65 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AP000857.1-201ENST00000532151 543 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 GTF3AP2-201ENST00000557014 266 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AGGF1P4-201ENST00000568249 801 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AL356432.3-201ENST00000568952 465 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AC012213.3-201ENST00000577199 777 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AP000254.1-201ENST00000609934 520 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AC100793.4-201ENST00000613683 429 ntBASIC3.1□□□□□ -1.91
LYSMD4Q5XG99 AC092140.2-201ENST00000618027 521 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms