Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF20Q5VTR2 AC068446.3-201ENST00000555285 382 ntBASIC5.73□□□□□ -1.49
RNF20Q5VTR2 OR4H12P-201ENST00000556269 907 ntBASIC5.73□□□□□ -1.49
RNF20Q5VTR2 AC012669.1-201ENST00000603209 283 ntBASIC5.73□□□□□ -1.49
RNF20Q5VTR2 MIR3976-201ENST00000606807 139 ntBASIC5.73□□□□□ -1.49
RNF20Q5VTR2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF20Q5VTR2 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
RNF20Q5VTR2 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RNF20Q5VTR2 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF20Q5VTR2 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF20Q5VTR2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF20Q5VTR2 PHKBP1-201ENST00000450951 1951 ntBASIC5.73□□□□□ -1.49
RNF20Q5VTR2 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 AL445487.1-201ENST00000415694 1580 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 MAPK10-263ENST00000641052 4307 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 RN7SKP115-201ENST00000363177 317 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 RNA5SP123-201ENST00000363244 119 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 MIR578-201ENST00000384828 96 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 AL592291.1-201ENST00000403830 352 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 RPS15AP6-201ENST00000420703 385 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 DAP3P1-201ENST00000441522 278 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 RPS11P1-201ENST00000451072 473 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 LINC01399-202ENST00000458450 244 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 RPS27AP13-201ENST00000498403 237 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 AC144568.1-201ENST00000520139 137 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 AC008033.2-201ENST00000542626 177 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 EDDM3DP-201ENST00000554692 434 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 AC022726.1-201ENST00000587475 207 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 HMGB2P1-201ENST00000591146 634 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 OR7E18P-201ENST00000592589 702 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 RPS29P30-201ENST00000600975 111 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 AC068790.4-201ENST00000602474 263 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 SDR42E1P1-201ENST00000611327 477 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 AC005344.1-201ENST00000613391 459 ntBASIC5.72□□□□□ -1.49
RNF20Q5VTR2 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF20Q5VTR2 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
RNF20Q5VTR2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF20Q5VTR2 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RNF20Q5VTR2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
RNF20Q5VTR2 ZNF285B-201ENST00000561698 1767 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF20Q5VTR2 RNU6-338P-201ENST00000383888 105 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 Y_RNA.471-201ENST00000384312 102 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 RNA5SP56-201ENST00000410277 118 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 RNU6-325P-201ENST00000411132 105 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF20Q5VTR2 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF20Q5VTR2 AURKAPS2-201ENST00000454983 333 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 AL445433.1-201ENST00000457507 257 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 RN7SL515P-201ENST00000463999 297 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 RPL37P6-202ENST00000464216 403 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF20Q5VTR2 AC113155.1-201ENST00000511141 769 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 RNU1-6P-201ENST00000516290 144 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 AC133555.2-201ENST00000550213 292 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF20Q5VTR2 AC093249.4-201ENST00000564755 259 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 MIR5699-201ENST00000578903 90 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 MIR4716-201ENST00000579628 84 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 AL390123.1-201ENST00000603216 237 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 AC073410.2-201ENST00000603240 332 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 RNF138P2-201ENST00000603490 592 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF20Q5VTR2 AL355480.1-201ENST00000629041 99 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 MIR4496-201ENST00000635896 61 ntBASIC5.71□□□□□ -1.5
RNF20Q5VTR2 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
RNF20Q5VTR2 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF20Q5VTR2 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RNF20Q5VTR2 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF20Q5VTR2 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF20Q5VTR2 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RNF20Q5VTR2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RNF20Q5VTR2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
RNF20Q5VTR2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF20Q5VTR2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RNF20Q5VTR2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF20Q5VTR2 RNU6-212P-201ENST00000362642 104 ntBASIC5.7□□□□□ -1.5
RNF20Q5VTR2 Y_RNA.105-201ENST00000363182 111 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms