Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 RNA5SP42-201ENST00000364278 115 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 SNORA70C-201ENST00000384538 135 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 MIR454-201ENST00000390180 115 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AL590002.1-201ENST00000406554 418 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 BX842559.1-201ENST00000419615 532 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 RPS15AP6-201ENST00000420703 385 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AL356867.1-201ENST00000429623 299 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 TAAR7P-201ENST00000436141 242 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 NDUFB4P6-201ENST00000436819 366 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 CBWD4P-201ENST00000445695 655 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 FDX1P2-201ENST00000450769 375 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 RPS7P7-201ENST00000463499 571 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AL672167.3-201ENST00000465951 960 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 RPL7P19-201ENST00000469948 618 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AC026784.1-201ENST00000507986 352 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 PCBP2P3-201ENST00000509726 843 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 Y_RNA.693-201ENST00000516641 110 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 RNU6-352P-201ENST00000516908 107 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AC104383.1-201ENST00000530297 370 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 HMGB1P6-201ENST00000569046 646 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AC002545.1-201ENST00000592511 181 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AL591034.3-201ENST00000605511 685 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AC008536.2-201ENST00000607284 349 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AC112484.5-201ENST00000624189 228 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AL160394.1-201ENST00000624765 724 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 AL732372.2-225ENST00000642124 456 ntBASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.5□□□□□ -1.85
RUNDC3AQ59EK9 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 MTND5P17-201ENST00000418405 1603 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 RNU6-1085P-201ENST00000363576 107 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 SNORA62.1-201ENST00000364287 154 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 RNU6-61P-201ENST00000365528 109 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 RNU4-48P-201ENST00000365559 182 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 RNU6-606P-201ENST00000384721 111 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 RNU6-1158P-201ENST00000391167 107 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 RPL21P65-201ENST00000406094 466 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 MTHFD2P2-201ENST00000407725 247 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 USP9YP18-201ENST00000425912 695 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 AC027673.1-201ENST00000456245 405 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 RNU6-420P-201ENST00000458780 107 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 AL121769.1-201ENST00000469473 401 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 AP002884.2-201ENST00000471647 395 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 AC103987.1-201ENST00000473394 348 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 RPS20P22-201ENST00000473700 357 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 AC108078.2-201ENST00000510750 236 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 AC108043.1-201ENST00000512696 574 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 RNU6-718P-201ENST00000516166 105 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 Y_RNA.704-201ENST00000516851 102 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 RN7SKP60-201ENST00000516985 239 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 OR5BN1P-201ENST00000532955 829 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 AC008011.1-201ENST00000545989 227 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 AC027807.1-201ENST00000559921 996 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 MIR4425-201ENST00000580572 84 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 AL365204.3-201ENST00000612448 685 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 U6atac.1-201ENST00000616025 117 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 MIR6500-201ENST00000622700 86 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 AC007998.5-201ENST00000622938 237 ntBASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RUNDC3AQ59EK9 PWAR6-201ENST00000552334 4618 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms