Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 KATNBL1P6-201ENST00000453433 915 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.93□□□□□ -1.94
SCN1BQ07699 SNORD97-201ENST00000459187 142 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 RPS3AP43-201ENST00000479743 781 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.93□□□□□ -1.94
SCN1BQ07699 RN7SL432P-201ENST00000484057 298 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 MTND1P22-201ENST00000510572 951 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AC104619.4-201ENST00000510773 249 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 APOOP4-201ENST00000513530 597 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.93□□□□□ -1.94
SCN1BQ07699 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.93□□□□□ -1.94
SCN1BQ07699 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.93□□□□□ -1.94
SCN1BQ07699 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.93□□□□□ -1.94
SCN1BQ07699 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.93□□□□□ -1.94
SCN1BQ07699 RPS3AP4-201ENST00000555161 764 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.93□□□□□ -1.94
SCN1BQ07699 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.93□□□□□ -1.94
SCN1BQ07699 AL670379.6-201ENST00000603753 252 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AL670379.11-201ENST00000604059 253 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AL358072.1-201ENST00000604156 575 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AL359999.1-201ENST00000604513 294 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AC008162.1-201ENST00000604718 254 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AL670379.1-201ENST00000604752 252 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AL670379.5-201ENST00000605253 252 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AL670379.12-201ENST00000605291 253 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AL670379.8-201ENST00000605353 252 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AL670379.7-201ENST00000605823 252 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AC103710.2-201ENST00000609912 942 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AC013562.2-201ENST00000611632 603 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AC122133.1-201ENST00000613964 233 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AC068831.8-201ENST00000620171 435 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SCN1BQ07699 AC079416.3-201ENST00000624479 549 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AC084035.1-201ENST00000634543 607 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 U2.21-201ENST00000637295 81 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AL359693.1-201ENST00000614959 2407 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.93□□□□□ -1.94
SCN1BQ07699 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SCN1BQ07699 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SCN1BQ07699 AP000568.1-201ENST00000282964 442 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 RNU6-778P-201ENST00000363269 103 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 RNU6-288P-201ENST00000363690 104 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 RNU5E-5P-201ENST00000365379 116 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 RNU1-73P-201ENST00000383971 164 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 RNU6-14P-201ENST00000384630 106 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 SNORA57.1-201ENST00000391227 145 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 RN7SKP202-201ENST00000410439 330 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 CYCSP19-201ENST00000411715 316 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 ATP5A1P2-201ENST00000412323 255 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 Z99755.1-201ENST00000414048 380 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.92□□□□□ -1.94
SCN1BQ07699 BPY2DP-201ENST00000422208 265 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 AL451062.2-201ENST00000427515 271 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.92□□□□□ -1.94
SCN1BQ07699 AC091286.1-201ENST00000431233 461 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 AL445584.1-201ENST00000431451 330 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 HSPD1P21-201ENST00000436541 245 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 MTND4P25-201ENST00000441039 533 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 NOTCH2P1-201ENST00000443481 624 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 ST13P20-201ENST00000447996 1065 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 RPL37P4-201ENST00000448908 268 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 MTND1P12-201ENST00000455231 147 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.92□□□□□ -1.94
SCN1BQ07699 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.92□□□□□ -1.94
SCN1BQ07699 SEM1P1-201ENST00000506694 209 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 RNU1-103P-201ENST00000516502 125 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.92□□□□□ -1.94
SCN1BQ07699 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.92□□□□□ -1.94
SCN1BQ07699 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.92□□□□□ -1.94
SCN1BQ07699 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.92□□□□□ -1.94
SCN1BQ07699 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.92□□□□□ -1.94
SCN1BQ07699 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.92□□□□□ -1.94
SCN1BQ07699 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.92□□□□□ -1.94
SCN1BQ07699 AL157394.1-201ENST00000562983 1224 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 AC083760.1-201ENST00000589621 670 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 AL137843.1-201ENST00000605078 385 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 AC092354.1-201ENST00000606057 376 ntBASIC2.92□□□□□ -1.94
SCN1BQ07699 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SCN1BQ07699 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SCN1BQ07699 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SCN1BQ07699 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SCN1BQ07699 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.92□□□□□ -1.94
SCN1BQ07699 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.92□□□□□ -1.94
SCN1BQ07699 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SCN1BQ07699 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SCN1BQ07699 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SCN1BQ07699 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.91□□□□□ -1.94
SCN1BQ07699 AL031577.2-201ENST00000404133 280 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 NDUFS5P4-201ENST00000412983 318 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.91□□□□□ -1.94
SCN1BQ07699 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.91□□□□□ -1.94
SCN1BQ07699 SEPT2P1-201ENST00000419651 180 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.91□□□□□ -1.94
SCN1BQ07699 AL592045.1-201ENST00000429867 352 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 AC073063.1-201ENST00000434352 607 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 MTND1P30-201ENST00000441241 901 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.91□□□□□ -1.94
SCN1BQ07699 USP9YP12-201ENST00000450481 570 ntBASIC2.91□□□□□ -1.94
SCN1BQ07699 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms