Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.95□□□□□ -1.94
CX3CL1P78423 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.95□□□□□ -1.94
CX3CL1P78423 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.95□□□□□ -1.94
CX3CL1P78423 AP001646.1-201ENST00000527936 915 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 OR5B19P-201ENST00000531766 928 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.95□□□□□ -1.94
CX3CL1P78423 NCAPGP2-201ENST00000557911 754 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 MIR5187-201ENST00000583479 76 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.95□□□□□ -1.94
CX3CL1P78423 Z84480.1-201ENST00000605131 311 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 AL365204.3-201ENST00000612448 685 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 AC034102.8-201ENST00000615146 484 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 AL158209.2-201ENST00000619266 216 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 AC007998.5-201ENST00000622938 237 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.95□□□□□ -1.94
CX3CL1P78423 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.95□□□□□ -1.94
CX3CL1P78423 PWAR6-201ENST00000552334 4618 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.95□□□□□ -1.94
CX3CL1P78423 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.95□□□□□ -1.94
CX3CL1P78423 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
CX3CL1P78423 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CX3CL1P78423 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CX3CL1P78423 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CX3CL1P78423 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.94□□□□□ -1.94
CX3CL1P78423 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.94□□□□□ -1.94
CX3CL1P78423 Y_RNA.1-201ENST00000352915 104 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
CX3CL1P78423 SOD2P1-201ENST00000396543 562 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.94□□□□□ -1.94
CX3CL1P78423 AC114491.1-201ENST00000416095 246 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.94□□□□□ -1.94
CX3CL1P78423 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.94□□□□□ -1.94
CX3CL1P78423 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.94□□□□□ -1.94
CX3CL1P78423 RPL23AP69-201ENST00000431134 458 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 HMGB1P27-201ENST00000431429 603 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 AL512844.2-201ENST00000433990 593 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 AC002486.1-201ENST00000435098 391 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 AC006539.3-201ENST00000454258 129 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
CX3CL1P78423 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CX3CL1P78423 RPS3AP14-201ENST00000483907 780 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 AC002456.2-201ENST00000509356 380 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.94□□□□□ -1.94
CX3CL1P78423 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.94□□□□□ -1.94
CX3CL1P78423 RNA5SP291-201ENST00000517222 105 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 RANP9-201ENST00000519957 271 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.94□□□□□ -1.94
CX3CL1P78423 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.94□□□□□ -1.94
CX3CL1P78423 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.94□□□□□ -1.94
CX3CL1P78423 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.94□□□□□ -1.94
CX3CL1P78423 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.94□□□□□ -1.94
CX3CL1P78423 AC024619.4-201ENST00000580924 316 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 AC068790.6-201ENST00000602558 258 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 AC098826.3-201ENST00000603823 466 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 AC104763.2-201ENST00000604179 382 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 AC007684.1-201ENST00000609671 477 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 AC068831.7-201ENST00000616954 363 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 AC093648.1-201ENST00000623546 606 ntBASIC2.94□□□□□ -1.94
CX3CL1P78423 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.94□□□□□ -1.94
CX3CL1P78423 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CX3CL1P78423 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CX3CL1P78423 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
CX3CL1P78423 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.94□□□□□ -1.94
CX3CL1P78423 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CX3CL1P78423 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
CX3CL1P78423 AL049641.1-201ENST00000441055 1948 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 AL136164.4-201ENST00000625013 2135 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CX3CL1P78423 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CX3CL1P78423 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CX3CL1P78423 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CX3CL1P78423 RNU6-1167P-201ENST00000363227 94 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 RNU6-288P-201ENST00000363690 104 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 RNU6-283P-201ENST00000364788 107 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 RNU6-190P-201ENST00000384154 102 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 SNORA24.1-201ENST00000384401 135 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 RNU6-1215P-201ENST00000384441 102 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 Y_RNA.505-201ENST00000384489 102 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 Y_RNA.516-201ENST00000384541 124 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 SNORA1.3-201ENST00000384676 136 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CX3CL1P78423 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CX3CL1P78423 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.93□□□□□ -1.94
CX3CL1P78423 AC092809.3-201ENST00000415453 231 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 MTATP6P18-201ENST00000417994 673 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 HMGB3P20-201ENST00000417997 600 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.93□□□□□ -1.94
CX3CL1P78423 SNRPEP4-201ENST00000435815 279 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.93□□□□□ -1.94
CX3CL1P78423 MTND1P34-201ENST00000438556 671 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 PRDX3P3-201ENST00000447765 522 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 RN7SL330P-201ENST00000469709 307 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 AC126389.1-201ENST00000477436 290 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 AL160314.1-201ENST00000490836 438 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 AC079382.1-201ENST00000493346 557 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 AC116562.3-201ENST00000506136 177 ntBASIC2.93□□□□□ -1.94
CX3CL1P78423 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.93□□□□□ -1.94
CX3CL1P78423 SNORD27.1-201ENST00000516319 72 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms