Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC8P31273 AC034105.3-201ENST00000565294 442 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 AC034268.2-201ENST00000571784 482 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 MIR544B-201ENST00000582372 78 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 MIR4298-201ENST00000584380 73 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 AC105224.1-201ENST00000587055 421 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXC8P31273 AC079089.3-201ENST00000603094 673 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 AP000403.1-201ENST00000603349 851 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 AC080078.2-201ENST00000603766 501 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC8P31273 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 AC009268.2-201ENST00000621925 457 ntBASIC3.43□□□□□ -1.86
HOXC8P31273 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC8P31273 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC8P31273 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC8P31273 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC8P31273 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
HOXC8P31273 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXC8P31273 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC8P31273 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HOXC8P31273 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
HOXC8P31273 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.43□□□□□ -1.86
HOXC8P31273 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HOXC8P31273 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC8P31273 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.42□□□□□ -1.86
HOXC8P31273 AC073325.2-201ENST00000339545 159 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 SNORA71.1-201ENST00000364523 117 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 SNORA48.8-201ENST00000391324 134 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 MTCO1P17-201ENST00000411522 491 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.42□□□□□ -1.86
HOXC8P31273 AC233728.2-201ENST00000425348 757 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC8P31273 RPL37P21-201ENST00000435890 276 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 HMGB3P11-201ENST00000440127 604 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 AC025750.2-201ENST00000442609 450 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC8P31273 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC8P31273 SSXP1-201ENST00000453640 473 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 TPT1P7-201ENST00000458300 517 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 RN7SL330P-201ENST00000469709 307 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 ARL2BPP4-201ENST00000506854 471 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC8P31273 POU5F1P7-201ENST00000508759 541 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 RPL23AP94-201ENST00000512518 302 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 AC034159.1-201ENST00000513885 583 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 NDUFB9P3-201ENST00000521269 501 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC8P31273 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.42□□□□□ -1.86
HOXC8P31273 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.42□□□□□ -1.86
HOXC8P31273 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC8P31273 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC8P31273 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC8P31273 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC8P31273 AC073648.5-201ENST00000603502 305 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 AC015871.2-201ENST00000603605 948 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC8P31273 AC004067.1-201ENST00000608733 700 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 MIR7106-201ENST00000612419 65 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HOXC8P31273 AC005858.4-201ENST00000623191 700 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 AC073476.4-201ENST00000628409 72 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 SNORA50A-202ENST00000629536 136 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 AC093591.3-201ENST00000634516 308 ntBASIC3.42□□□□□ -1.86
HOXC8P31273 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC8P31273 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXC8P31273 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
HOXC8P31273 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC8P31273 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HOXC8P31273 RNU6-853P-201ENST00000364306 107 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 RNU5E-5P-201ENST00000365379 116 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 RNU1-101P-201ENST00000391171 127 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 AL031121.1-201ENST00000406553 254 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 RNU6-648P-201ENST00000410190 107 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 RNU6-516P-201ENST00000411381 104 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC8P31273 AF274854.1-201ENST00000413236 615 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXC8P31273 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXC8P31273 AC090774.1-201ENST00000435925 246 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 HIGD1AP11-201ENST00000438361 280 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXC8P31273 GDI2P2-201ENST00000445131 608 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 MTND1P27-201ENST00000451117 902 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 AC104308.1-201ENST00000454621 333 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 OR6K1P-201ENST00000456766 971 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 RPL31P60-201ENST00000478450 367 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 HMGB1P36-201ENST00000487709 576 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 AC106872.3-201ENST00000495104 446 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXC8P31273 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC8P31273 RNU6-1231P-201ENST00000517185 103 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 AP002453.2-201ENST00000533503 320 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 AC068587.4-201ENST00000533893 186 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXC8P31273 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXC8P31273 MIR3186-201ENST00000577404 85 ntBASIC3.41□□□□□ -1.86
HOXC8P31273 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC8P31273 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXC8P31273 AC015540.1-201ENST00000615828 501 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms