Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CD48P09326 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.18□□□□□ -1.9
CD48P09326 PSPHP1-201ENST00000450062 261 ntBASIC3.18□□□□□ -1.9
CD48P09326 FGF7P6-202ENST00000451282 293 ntBASIC3.18□□□□□ -1.9
CD48P09326 AL359385.1-201ENST00000456509 365 ntBASIC3.18□□□□□ -1.9
CD48P09326 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.18□□□□□ -1.9
CD48P09326 snoU13.3-201ENST00000459441 104 ntBASIC3.18□□□□□ -1.9
CD48P09326 RPS3AP17-201ENST00000472594 777 ntBASIC3.18□□□□□ -1.9
CD48P09326 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.18□□□□□ -1.9
CD48P09326 AC055855.1-201ENST00000489563 579 ntBASIC3.18□□□□□ -1.9
CD48P09326 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.18□□□□□ -1.9
CD48P09326 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.18□□□□□ -1.9
CD48P09326 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
CD48P09326 AP003385.6-201ENST00000531603 374 ntBASIC3.18□□□□□ -1.9
CD48P09326 AC123904.2-201ENST00000548059 300 ntBASIC3.18□□□□□ -1.9
CD48P09326 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.18□□□□□ -1.9
CD48P09326 AC124947.2-202ENST00000552735 133 ntBASIC3.18□□□□□ -1.9
CD48P09326 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.18□□□□□ -1.9
CD48P09326 AL391840.1-201ENST00000571144 367 ntBASIC3.18□□□□□ -1.9
CD48P09326 MIR4801-201ENST00000582704 82 ntBASIC3.18□□□□□ -1.9
CD48P09326 MIR4506-201ENST00000584693 77 ntBASIC3.18□□□□□ -1.9
CD48P09326 AL669831.4-202ENST00000590817 238 ntBASIC3.18□□□□□ -1.9
CD48P09326 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.18□□□□□ -1.9
CD48P09326 AC245014.2-201ENST00000603689 287 ntBASIC3.18□□□□□ -1.9
CD48P09326 AC246785.4-201ENST00000605374 287 ntBASIC3.18□□□□□ -1.9
CD48P09326 AC006329.2-201ENST00000611491 394 ntBASIC3.18□□□□□ -1.9
CD48P09326 XIST_intron.1-201ENST00000619444 68 ntBASIC3.18□□□□□ -1.9
CD48P09326 AC099506.2-201ENST00000623074 221 ntBASIC3.18□□□□□ -1.9
CD48P09326 AC040168.1-201ENST00000623594 991 ntBASIC3.18□□□□□ -1.9
CD48P09326 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CD48P09326 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CD48P09326 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.18□□□□□ -1.9
CD48P09326 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CD48P09326 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CD48P09326 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CD48P09326 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CD48P09326 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.17□□□□□ -1.9
CD48P09326 SNORD15B-201ENST00000384714 146 ntBASIC3.17□□□□□ -1.9
CD48P09326 RPL23AP32-201ENST00000395315 459 ntBASIC3.17□□□□□ -1.9
CD48P09326 GSTA9P-201ENST00000406231 611 ntBASIC3.17□□□□□ -1.9
CD48P09326 RNU4-47P-201ENST00000410876 114 ntBASIC3.17□□□□□ -1.9
CD48P09326 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.17□□□□□ -1.9
CD48P09326 MTND1P21-201ENST00000412991 285 ntBASIC3.17□□□□□ -1.9
CD48P09326 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.17□□□□□ -1.9
CD48P09326 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.17□□□□□ -1.9
CD48P09326 USP9YP18-201ENST00000425912 695 ntBASIC3.17□□□□□ -1.9
CD48P09326 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.17□□□□□ -1.9
CD48P09326 TIMM9P3-201ENST00000428659 274 ntBASIC3.17□□□□□ -1.9
CD48P09326 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.17□□□□□ -1.9
CD48P09326 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.17□□□□□ -1.9
CD48P09326 RPS3AP12-201ENST00000443616 753 ntBASIC3.17□□□□□ -1.9
CD48P09326 AC003071.1-201ENST00000451219 789 ntBASIC3.17□□□□□ -1.9
CD48P09326 UQCRHP3-201ENST00000451503 251 ntBASIC3.17□□□□□ -1.9
CD48P09326 HMGB1P29-201ENST00000505659 499 ntBASIC3.17□□□□□ -1.9
CD48P09326 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.17□□□□□ -1.9
CD48P09326 AC010265.1-201ENST00000513509 211 ntBASIC3.17□□□□□ -1.9
CD48P09326 RNU4-60P-201ENST00000517239 135 ntBASIC3.17□□□□□ -1.9
CD48P09326 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.17□□□□□ -1.9
CD48P09326 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.17□□□□□ -1.9
CD48P09326 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.17□□□□□ -1.9
CD48P09326 AC087883.1-201ENST00000551882 391 ntBASIC3.17□□□□□ -1.9
CD48P09326 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.17□□□□□ -1.9
CD48P09326 AL356432.3-201ENST00000568952 465 ntBASIC3.17□□□□□ -1.9
CD48P09326 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.17□□□□□ -1.9
CD48P09326 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.17□□□□□ -1.9
CD48P09326 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.17□□□□□ -1.9
CD48P09326 AF250324.2-201ENST00000608299 610 ntBASIC3.17□□□□□ -1.9
CD48P09326 AC007318.2-201ENST00000620999 243 ntBASIC3.17□□□□□ -1.9
CD48P09326 AC091953.5-201ENST00000622919 233 ntBASIC3.17□□□□□ -1.9
CD48P09326 AC079597.1-201ENST00000624306 508 ntBASIC3.17□□□□□ -1.9
CD48P09326 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.17□□□□□ -1.9
CD48P09326 AC110994.2-201ENST00000635481 492 ntBASIC3.17□□□□□ -1.9
CD48P09326 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.17□□□□□ -1.9
CD48P09326 OR5H6-203ENST00000642105 978 ntBASIC3.17□□□□□ -1.9
CD48P09326 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.17□□□□□ -1.9
CD48P09326 AC093536.2-201ENST00000565257 1406 ntBASIC3.17□□□□□ -1.9
CD48P09326 AC010733.2-201ENST00000589496 5702 ntBASIC3.16□□□□□ -1.9
CD48P09326 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.16□□□□□ -1.9
CD48P09326 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.16□□□□□ -1.9
CD48P09326 AC138915.3-201ENST00000562908 1389 ntBASIC3.16□□□□□ -1.9
CD48P09326 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.16□□□□□ -1.9
CD48P09326 RNU4-1-201ENST00000363925 141 ntBASIC3.16□□□□□ -1.9
CD48P09326 RNA5SP72-201ENST00000364442 117 ntBASIC3.16□□□□□ -1.9
CD48P09326 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CD48P09326 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CD48P09326 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CD48P09326 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.16□□□□□ -1.9
CD48P09326 MRPL42P2-201ENST00000403169 426 ntBASIC3.16□□□□□ -1.9
CD48P09326 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.16□□□□□ -1.9
CD48P09326 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.16□□□□□ -1.9
CD48P09326 BX295541.1-201ENST00000417774 250 ntBASIC3.16□□□□□ -1.9
CD48P09326 AL353678.1-201ENST00000422735 741 ntBASIC3.16□□□□□ -1.9
CD48P09326 AC091390.3-201ENST00000426478 338 ntBASIC3.16□□□□□ -1.9
CD48P09326 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.16□□□□□ -1.9
CD48P09326 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.16□□□□□ -1.9
CD48P09326 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.16□□□□□ -1.9
CD48P09326 UBE2V1P8-201ENST00000437166 265 ntBASIC3.16□□□□□ -1.9
CD48P09326 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.16□□□□□ -1.9
CD48P09326 BX510359.1-201ENST00000456973 237 ntBASIC3.16□□□□□ -1.9
CD48P09326 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 251.9 ms