Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SEMA3DO95025 RNU6-413P-201ENST00000384115 107 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 MIR767-201ENST00000390228 109 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SEMA3DO95025 RPL23AP29-201ENST00000397284 453 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 RNU4-72P-201ENST00000410754 173 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 PPP1R11P2-201ENST00000423543 382 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.28□□□□□ -2.04
SEMA3DO95025 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.28□□□□□ -2.04
SEMA3DO95025 PGBD4P3-201ENST00000440731 581 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 COX6CP12-201ENST00000446748 202 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 ARPC3P5-201ENST00000448802 534 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 MTATP6P14-201ENST00000455189 673 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.28□□□□□ -2.04
SEMA3DO95025 snoU13.8-201ENST00000458890 104 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 RNU7-26P-201ENST00000458980 63 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.28□□□□□ -2.04
SEMA3DO95025 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 RNA5SP24-201ENST00000516478 95 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.28□□□□□ -2.04
SEMA3DO95025 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.28□□□□□ -2.04
SEMA3DO95025 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.28□□□□□ -2.04
SEMA3DO95025 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 ISCA1P3-201ENST00000577104 373 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.28□□□□□ -2.04
SEMA3DO95025 MTND3P19-201ENST00000603825 345 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 AC006023.1-201ENST00000603944 259 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 AC011451.2-201ENST00000604303 598 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 AC021749.1-201ENST00000604322 607 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 AC131235.4-201ENST00000609288 620 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 AL357080.1-201ENST00000617394 239 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 AL449363.1-201ENST00000617815 186 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.28□□□□□ -2.04
SEMA3DO95025 SCARNA15.3-201ENST00000626315 122 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 SCARNA4.1-201ENST00000628597 123 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.28□□□□□ -2.04
SEMA3DO95025 OR4G2P-202ENST00000641004 1759 ntBASIC2.28□□□□□ -2.04
SEMA3DO95025 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
SEMA3DO95025 MTCO1P9-201ENST00000505577 1534 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.27□□□□□ -2.05
SEMA3DO95025 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SEMA3DO95025 AC069528.2-201ENST00000624849 1991 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
SEMA3DO95025 AC022336.2-201ENST00000568966 2538 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SEMA3DO95025 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SEMA3DO95025 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SEMA3DO95025 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SEMA3DO95025 MIR21-201ENST00000362134 72 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 RNU5E-8P-201ENST00000363502 116 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 RNU6-560P-201ENST00000364007 108 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 SNORA68.1-201ENST00000364537 132 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 SNORA36C-201ENST00000384289 132 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 MIR514A1-201ENST00000385133 98 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SEMA3DO95025 USP9YP27-201ENST00000418455 438 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 AC018630.2-202ENST00000422992 927 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 MTCO3P30-201ENST00000426425 670 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.27□□□□□ -2.05
SEMA3DO95025 MTND5P14-201ENST00000441481 1267 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 MTCO2P25-201ENST00000447065 681 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 ZNF886P-201ENST00000450781 723 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.27□□□□□ -2.05
SEMA3DO95025 snoU13.28-201ENST00000459235 104 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 RPL30P5-201ENST00000494923 336 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.27□□□□□ -2.05
SEMA3DO95025 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.27□□□□□ -2.05
SEMA3DO95025 NDUFB4P2-201ENST00000509515 391 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.27□□□□□ -2.05
SEMA3DO95025 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.27□□□□□ -2.05
SEMA3DO95025 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.27□□□□□ -2.05
SEMA3DO95025 DEFB131D-201ENST00000526803 184 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.27□□□□□ -2.05
SEMA3DO95025 OR6C7P-201ENST00000547875 934 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 CYCSP2-201ENST00000558168 301 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 AC011471.1-201ENST00000585766 187 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 AC009269.6-201ENST00000621778 588 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SEMA3DO95025 CTSLP2-204ENST00000629029 392 ntBASIC2.27□□□□□ -2.05
SEMA3DO95025 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
SEMA3DO95025 AC005832.2-201ENST00000538921 1430 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SEMA3DO95025 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SEMA3DO95025 SNORD116.1-201ENST00000365628 92 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.26□□□□□ -2.05
SEMA3DO95025 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SEMA3DO95025 MIR122-201ENST00000385044 85 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SEMA3DO95025 ERHP2-201ENST00000402323 299 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 RNU4-22P-201ENST00000411058 166 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 MORF4L1P6-201ENST00000418771 268 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.26□□□□□ -2.05
SEMA3DO95025 AC009414.1-201ENST00000427200 443 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 USP9YP11-201ENST00000427537 717 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.26□□□□□ -2.05
SEMA3DO95025 ATP5F1P1-201ENST00000433775 569 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 TAAR7P-201ENST00000436141 242 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 UBE2V1P13-201ENST00000436983 439 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.26□□□□□ -2.05
SEMA3DO95025 AC009237.8-201ENST00000445492 379 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms