Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC109635.3-201ENST00000529536 185 ntBASIC3.64□□□□□ -1.83
MSI1O43347 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.64□□□□□ -1.83
MSI1O43347 AL121576.1-201ENST00000556055 276 ntBASIC3.64□□□□□ -1.83
MSI1O43347 AL359212.1-201ENST00000556608 614 ntBASIC3.64□□□□□ -1.83
MSI1O43347 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.64□□□□□ -1.83
MSI1O43347 AC098848.2-201ENST00000588023 330 ntBASIC3.64□□□□□ -1.83
MSI1O43347 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.64□□□□□ -1.83
MSI1O43347 AP000907.4-201ENST00000604143 237 ntBASIC3.64□□□□□ -1.83
MSI1O43347 Z84480.1-201ENST00000605131 311 ntBASIC3.64□□□□□ -1.83
MSI1O43347 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.64□□□□□ -1.83
MSI1O43347 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.64□□□□□ -1.83
MSI1O43347 AC004696.1-201ENST00000614345 607 ntBASIC3.64□□□□□ -1.83
MSI1O43347 MIR1321-201ENST00000637766 79 ntBASIC3.64□□□□□ -1.83
MSI1O43347 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.64□□□□□ -1.83
MSI1O43347 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
MSI1O43347 AL136964.1-201ENST00000622038 2990 ntBASIC3.64□□□□□ -1.83
MSI1O43347 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
MSI1O43347 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
MSI1O43347 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
MSI1O43347 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
MSI1O43347 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
MSI1O43347 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
MSI1O43347 RNU6-335P-201ENST00000364563 113 ntBASIC3.63□□□□□ -1.83
MSI1O43347 RNU6-534P-201ENST00000364877 106 ntBASIC3.63□□□□□ -1.83
MSI1O43347 MIR184-201ENST00000384962 84 ntBASIC3.63□□□□□ -1.83
MSI1O43347 SNORD17-201ENST00000390930 237 ntBASIC3.63□□□□□ -1.83
MSI1O43347 RNU2-9P-201ENST00000410194 145 ntBASIC3.63□□□□□ -1.83
MSI1O43347 Y_RNA.604-201ENST00000410574 102 ntBASIC3.63□□□□□ -1.83
MSI1O43347 BX842559.1-201ENST00000419615 532 ntBASIC3.63□□□□□ -1.83
MSI1O43347 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.63□□□□□ -1.83
MSI1O43347 AL159987.2-201ENST00000432754 307 ntBASIC3.63□□□□□ -1.83
MSI1O43347 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.63□□□□□ -1.83
MSI1O43347 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.63□□□□□ -1.83
MSI1O43347 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.63□□□□□ -1.83
MSI1O43347 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.63□□□□□ -1.83
MSI1O43347 SNRPGP6-201ENST00000451124 220 ntBASIC3.63□□□□□ -1.83
MSI1O43347 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.63□□□□□ -1.83
MSI1O43347 CYCSP35-201ENST00000451978 304 ntBASIC3.63□□□□□ -1.83
MSI1O43347 RBMY2UP-201ENST00000453474 324 ntBASIC3.63□□□□□ -1.83
MSI1O43347 SNORA59A-201ENST00000459326 152 ntBASIC3.63□□□□□ -1.83
MSI1O43347 AC008155.2-201ENST00000464337 397 ntBASIC3.63□□□□□ -1.83
MSI1O43347 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.63□□□□□ -1.83
MSI1O43347 RN7SL594P-201ENST00000470590 287 ntBASIC3.63□□□□□ -1.83
MSI1O43347 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.63□□□□□ -1.83
MSI1O43347 AC093278.1-201ENST00000494700 600 ntBASIC3.63□□□□□ -1.83
MSI1O43347 HMGB1P22-201ENST00000505315 124 ntBASIC3.63□□□□□ -1.83
MSI1O43347 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.63□□□□□ -1.83
MSI1O43347 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.63□□□□□ -1.83
MSI1O43347 SNORA74D-201ENST00000516404 141 ntBASIC3.63□□□□□ -1.83
MSI1O43347 RNU6-410P-201ENST00000517006 107 ntBASIC3.63□□□□□ -1.83
MSI1O43347 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.63□□□□□ -1.83
MSI1O43347 AC011979.2-201ENST00000527568 352 ntBASIC3.63□□□□□ -1.83
MSI1O43347 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.63□□□□□ -1.83
MSI1O43347 AC123904.3-201ENST00000547218 814 ntBASIC3.63□□□□□ -1.83
MSI1O43347 AL512310.1-201ENST00000548639 172 ntBASIC3.63□□□□□ -1.83
MSI1O43347 AC068135.2-201ENST00000569293 1028 ntBASIC3.63□□□□□ -1.83
MSI1O43347 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.63□□□□□ -1.83
MSI1O43347 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.63□□□□□ -1.83
MSI1O43347 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.63□□□□□ -1.83
MSI1O43347 AC007621.1-201ENST00000604544 437 ntBASIC3.63□□□□□ -1.83
MSI1O43347 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.63□□□□□ -1.83
MSI1O43347 AL121992.2-201ENST00000606262 256 ntBASIC3.63□□□□□ -1.83
MSI1O43347 AP002360.4-201ENST00000606980 481 ntBASIC3.63□□□□□ -1.83
MSI1O43347 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.63□□□□□ -1.83
MSI1O43347 AC093788.1-201ENST00000609356 927 ntBASIC3.63□□□□□ -1.83
MSI1O43347 MIR7851-201ENST00000610611 160 ntBASIC3.63□□□□□ -1.83
MSI1O43347 AC019176.2-201ENST00000611579 315 ntBASIC3.63□□□□□ -1.83
MSI1O43347 AL355073.2-201ENST00000612106 557 ntBASIC3.63□□□□□ -1.83
MSI1O43347 TUG1_2.1-201ENST00000614234 87 ntBASIC3.63□□□□□ -1.83
MSI1O43347 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
MSI1O43347 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.63□□□□□ -1.83
MSI1O43347 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.63□□□□□ -1.83
MSI1O43347 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
MSI1O43347 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
MSI1O43347 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
MSI1O43347 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
MSI1O43347 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
MSI1O43347 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
MSI1O43347 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
MSI1O43347 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.63□□□□□ -1.83
MSI1O43347 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
MSI1O43347 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
MSI1O43347 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
MSI1O43347 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.62□□□□□ -1.83
MSI1O43347 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
MSI1O43347 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.62□□□□□ -1.83
MSI1O43347 XIAPP3-201ENST00000312918 795 ntBASIC3.62□□□□□ -1.83
MSI1O43347 HSPE1P11-201ENST00000339579 310 ntBASIC3.62□□□□□ -1.83
MSI1O43347 RNU6-1120P-201ENST00000362988 108 ntBASIC3.62□□□□□ -1.83
MSI1O43347 RNA5SP235-201ENST00000365411 114 ntBASIC3.62□□□□□ -1.83
MSI1O43347 Y_RNA.367-201ENST00000365544 101 ntBASIC3.62□□□□□ -1.83
MSI1O43347 RNY3P14-201ENST00000384309 102 ntBASIC3.62□□□□□ -1.83
MSI1O43347 MIR491-201ENST00000384877 84 ntBASIC3.62□□□□□ -1.83
MSI1O43347 MIR558-201ENST00000384920 94 ntBASIC3.62□□□□□ -1.83
MSI1O43347 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.62□□□□□ -1.83
MSI1O43347 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.62□□□□□ -1.83
MSI1O43347 USP9YP27-201ENST00000418455 438 ntBASIC3.62□□□□□ -1.83
MSI1O43347 AC006989.1-201ENST00000427212 131 ntBASIC3.62□□□□□ -1.83
MSI1O43347 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.62□□□□□ -1.83
MSI1O43347 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms