Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.69□□□□□ -1.98
MSH4O15457 RNU6-757P-201ENST00000410334 100 ntBASIC2.69□□□□□ -1.98
MSH4O15457 RNU6-584P-201ENST00000410350 95 ntBASIC2.69□□□□□ -1.98
MSH4O15457 TPMTP3-201ENST00000411928 735 ntBASIC2.69□□□□□ -1.98
MSH4O15457 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.69□□□□□ -1.98
MSH4O15457 AC083875.1-201ENST00000419509 405 ntBASIC2.69□□□□□ -1.98
MSH4O15457 AC013410.2-201ENST00000422627 201 ntBASIC2.69□□□□□ -1.98
MSH4O15457 AC008850.1-201ENST00000427546 362 ntBASIC2.69□□□□□ -1.98
MSH4O15457 EEF1B2P7-201ENST00000451177 676 ntBASIC2.69□□□□□ -1.98
MSH4O15457 SETP11-201ENST00000473027 690 ntBASIC2.69□□□□□ -1.98
MSH4O15457 GTF2IP9-201ENST00000502460 301 ntBASIC2.69□□□□□ -1.98
MSH4O15457 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.69□□□□□ -1.98
MSH4O15457 TPT1P8-201ENST00000510120 555 ntBASIC2.69□□□□□ -1.98
MSH4O15457 TTC39CP1-201ENST00000512513 755 ntBASIC2.69□□□□□ -1.98
MSH4O15457 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.69□□□□□ -1.98
MSH4O15457 SCARNA15.2-201ENST00000516409 127 ntBASIC2.69□□□□□ -1.98
MSH4O15457 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
MSH4O15457 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.69□□□□□ -1.98
MSH4O15457 OR5BN1P-201ENST00000532955 829 ntBASIC2.69□□□□□ -1.98
MSH4O15457 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.69□□□□□ -1.98
MSH4O15457 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
MSH4O15457 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
MSH4O15457 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.69□□□□□ -1.98
MSH4O15457 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.69□□□□□ -1.98
MSH4O15457 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.69□□□□□ -1.98
MSH4O15457 ACTR3BP3-201ENST00000565577 979 ntBASIC2.69□□□□□ -1.98
MSH4O15457 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.69□□□□□ -1.98
MSH4O15457 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.69□□□□□ -1.98
MSH4O15457 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.69□□□□□ -1.98
MSH4O15457 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.69□□□□□ -1.98
MSH4O15457 VN1R82P-201ENST00000601481 356 ntBASIC2.69□□□□□ -1.98
MSH4O15457 AC011458.1-201ENST00000604034 617 ntBASIC2.69□□□□□ -1.98
MSH4O15457 NUTF2P8-201ENST00000604593 363 ntBASIC2.69□□□□□ -1.98
MSH4O15457 AL592221.1-201ENST00000605266 382 ntBASIC2.69□□□□□ -1.98
MSH4O15457 AC067747.1-201ENST00000608026 250 ntBASIC2.69□□□□□ -1.98
MSH4O15457 AC007349.4-201ENST00000608114 532 ntBASIC2.69□□□□□ -1.98
MSH4O15457 AC024933.1-201ENST00000608472 348 ntBASIC2.69□□□□□ -1.98
MSH4O15457 MIR4275-201ENST00000636486 87 ntBASIC2.69□□□□□ -1.98
MSH4O15457 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
MSH4O15457 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
MSH4O15457 SDAD1P2-201ENST00000441308 2028 ntBASIC2.68□□□□□ -1.98
MSH4O15457 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
MSH4O15457 MIR21-201ENST00000362134 72 ntBASIC2.68□□□□□ -1.98
MSH4O15457 RNU6-799P-201ENST00000363567 107 ntBASIC2.68□□□□□ -1.98
MSH4O15457 MIR325-201ENST00000385260 98 ntBASIC2.68□□□□□ -1.98
MSH4O15457 AL445529.1-201ENST00000398713 389 ntBASIC2.68□□□□□ -1.98
MSH4O15457 RNU6-516P-201ENST00000411381 104 ntBASIC2.68□□□□□ -1.98
MSH4O15457 SSR1P2-201ENST00000415208 787 ntBASIC2.68□□□□□ -1.98
MSH4O15457 RPL7P10-201ENST00000417407 739 ntBASIC2.68□□□□□ -1.98
MSH4O15457 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.68□□□□□ -1.98
MSH4O15457 SAR1AP4-201ENST00000429225 591 ntBASIC2.68□□□□□ -1.98
MSH4O15457 TXNL1P1-201ENST00000429528 554 ntBASIC2.68□□□□□ -1.98
MSH4O15457 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.68□□□□□ -1.98
MSH4O15457 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.68□□□□□ -1.98
MSH4O15457 MTCO1P27-201ENST00000448269 226 ntBASIC2.68□□□□□ -1.98
MSH4O15457 MTND1P9-201ENST00000453775 944 ntBASIC2.68□□□□□ -1.98
MSH4O15457 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.68□□□□□ -1.98
MSH4O15457 RPS27P27-201ENST00000498779 255 ntBASIC2.68□□□□□ -1.98
MSH4O15457 AC091951.3-201ENST00000504093 246 ntBASIC2.68□□□□□ -1.98
MSH4O15457 TBCAP3-201ENST00000512475 312 ntBASIC2.68□□□□□ -1.98
MSH4O15457 MTCYBP43-201ENST00000513621 740 ntBASIC2.68□□□□□ -1.98
MSH4O15457 RNA5SP216-201ENST00000516111 123 ntBASIC2.68□□□□□ -1.98
MSH4O15457 RNU6-840P-201ENST00000517275 65 ntBASIC2.68□□□□□ -1.98
MSH4O15457 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.68□□□□□ -1.98
MSH4O15457 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.68□□□□□ -1.98
MSH4O15457 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.68□□□□□ -1.98
MSH4O15457 AC124947.2-202ENST00000552735 133 ntBASIC2.68□□□□□ -1.98
MSH4O15457 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.68□□□□□ -1.98
MSH4O15457 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.68□□□□□ -1.98
MSH4O15457 AC107294.1-201ENST00000609524 467 ntBASIC2.68□□□□□ -1.98
MSH4O15457 AL359198.2-201ENST00000611836 194 ntBASIC2.68□□□□□ -1.98
MSH4O15457 AL136981.2-201ENST00000617319 734 ntBASIC2.68□□□□□ -1.98
MSH4O15457 AC009268.2-201ENST00000621925 457 ntBASIC2.68□□□□□ -1.98
MSH4O15457 AL078595.3-201ENST00000623815 1166 ntBASIC2.68□□□□□ -1.98
MSH4O15457 AC090617.7-201ENST00000623952 126 ntBASIC2.68□□□□□ -1.98
MSH4O15457 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.68□□□□□ -1.98
MSH4O15457 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.68□□□□□ -1.98
MSH4O15457 OR5H6-203ENST00000642105 978 ntBASIC2.68□□□□□ -1.98
MSH4O15457 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
MSH4O15457 AC006020.1-201ENST00000420179 1854 ntBASIC2.67□□□□□ -1.98
MSH4O15457 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
MSH4O15457 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
MSH4O15457 RNU6-462P-201ENST00000362659 105 ntBASIC2.67□□□□□ -1.98
MSH4O15457 RNU6-853P-201ENST00000364306 107 ntBASIC2.67□□□□□ -1.98
MSH4O15457 RNU6-1027P-201ENST00000383998 107 ntBASIC2.67□□□□□ -1.98
MSH4O15457 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.67□□□□□ -1.98
MSH4O15457 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.67□□□□□ -1.98
MSH4O15457 UBE2V1P13-201ENST00000436983 439 ntBASIC2.67□□□□□ -1.98
MSH4O15457 LSM1P1-201ENST00000438629 273 ntBASIC2.67□□□□□ -1.98
MSH4O15457 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.67□□□□□ -1.98
MSH4O15457 RNU6-928P-201ENST00000516876 104 ntBASIC2.67□□□□□ -1.98
MSH4O15457 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.67□□□□□ -1.98
MSH4O15457 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.67□□□□□ -1.98
MSH4O15457 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.67□□□□□ -1.98
MSH4O15457 MTND4P33-201ENST00000556706 766 ntBASIC2.67□□□□□ -1.98
MSH4O15457 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.67□□□□□ -1.98
MSH4O15457 MIR4435-1-201ENST00000582552 80 ntBASIC2.67□□□□□ -1.98
MSH4O15457 AC013412.1-201ENST00000610687 192 ntBASIC2.67□□□□□ -1.98
MSH4O15457 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
MSH4O15457 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms