Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC084757.4-201ENST00000616350 526 ntBASIC5.01□□□□□ -1.61
SOX1O00570 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.01□□□□□ -1.61
SOX1O00570 MIR4275-201ENST00000636486 87 ntBASIC5.01□□□□□ -1.61
SOX1O00570 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
SOX1O00570 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SOX1O00570 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
SOX1O00570 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
SOX1O00570 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SOX1O00570 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SOX1O00570 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5□□□□□ -1.61
SOX1O00570 TLK1P1-201ENST00000456760 2440 ntBASIC5□□□□□ -1.61
SOX1O00570 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SOX1O00570 Y_RNA.14-201ENST00000362415 103 ntBASIC5□□□□□ -1.61
SOX1O00570 RNU6-817P-201ENST00000391083 104 ntBASIC5□□□□□ -1.61
SOX1O00570 RNA5SP56-201ENST00000410277 118 ntBASIC5□□□□□ -1.61
SOX1O00570 RNU6-174P-201ENST00000410406 106 ntBASIC5□□□□□ -1.61
SOX1O00570 Z92545.1-201ENST00000411782 234 ntBASIC5□□□□□ -1.61
SOX1O00570 AL137014.1-201ENST00000420490 1226 ntBASIC5□□□□□ -1.61
SOX1O00570 BX276092.3-201ENST00000424182 230 ntBASIC5□□□□□ -1.61
SOX1O00570 NDUFB4P8-201ENST00000435351 367 ntBASIC5□□□□□ -1.61
SOX1O00570 MRPL48P1-201ENST00000445390 636 ntBASIC5□□□□□ -1.61
SOX1O00570 CHEK2P4-201ENST00000450340 246 ntBASIC5□□□□□ -1.61
SOX1O00570 MTCO3P8-201ENST00000453691 755 ntBASIC5□□□□□ -1.61
SOX1O00570 RPL21P41-201ENST00000459863 264 ntBASIC5□□□□□ -1.61
SOX1O00570 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5□□□□□ -1.61
SOX1O00570 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5□□□□□ -1.61
SOX1O00570 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5□□□□□ -1.61
SOX1O00570 AP003385.6-201ENST00000531603 374 ntBASIC5□□□□□ -1.61
SOX1O00570 AC027369.5-201ENST00000533838 755 ntBASIC5□□□□□ -1.61
SOX1O00570 TRAV8-5-201ENST00000537369 341 ntBASIC5□□□□□ -1.61
SOX1O00570 AC040958.1-201ENST00000561102 201 ntBASIC5□□□□□ -1.61
SOX1O00570 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
SOX1O00570 RN7SL600P-201ENST00000581811 299 ntBASIC5□□□□□ -1.61
SOX1O00570 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5□□□□□ -1.61
SOX1O00570 HMGB1P50-201ENST00000605814 607 ntBASIC5□□□□□ -1.61
SOX1O00570 AL591516.1-201ENST00000611326 274 ntBASIC5□□□□□ -1.61
SOX1O00570 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5□□□□□ -1.61
SOX1O00570 AP005435.3-201ENST00000531260 3198 ntBASIC5□□□□□ -1.61
SOX1O00570 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5□□□□□ -1.61
SOX1O00570 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SOX1O00570 ADAM24P-201ENST00000398655 2101 ntBASIC5□□□□□ -1.61
SOX1O00570 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5□□□□□ -1.61
SOX1O00570 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5□□□□□ -1.61
SOX1O00570 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5□□□□□ -1.61
SOX1O00570 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SOX1O00570 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SOX1O00570 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SOX1O00570 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SOX1O00570 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SOX1O00570 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.99□□□□□ -1.61
SOX1O00570 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SOX1O00570 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SOX1O00570 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.99□□□□□ -1.61
SOX1O00570 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SOX1O00570 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SOX1O00570 Y_RNA.376-201ENST00000365638 108 ntBASIC4.99□□□□□ -1.61
SOX1O00570 Y_RNA.526-201ENST00000384572 110 ntBASIC4.99□□□□□ -1.61
SOX1O00570 MIR135A2-201ENST00000384854 100 ntBASIC4.99□□□□□ -1.61
SOX1O00570 MIR218-2-201ENST00000385006 110 ntBASIC4.99□□□□□ -1.61
SOX1O00570 AP000580.1-201ENST00000404439 358 ntBASIC4.99□□□□□ -1.61
SOX1O00570 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.99□□□□□ -1.61
SOX1O00570 RPS26P47-201ENST00000427219 348 ntBASIC4.99□□□□□ -1.61
SOX1O00570 AC073063.1-201ENST00000434352 607 ntBASIC4.99□□□□□ -1.61
SOX1O00570 AC004866.2-201ENST00000438285 481 ntBASIC4.99□□□□□ -1.61
SOX1O00570 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.99□□□□□ -1.61
SOX1O00570 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.99□□□□□ -1.61
SOX1O00570 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.99□□□□□ -1.61
SOX1O00570 AC018437.1-201ENST00000492214 406 ntBASIC4.99□□□□□ -1.61
SOX1O00570 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.99□□□□□ -1.61
SOX1O00570 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.99□□□□□ -1.61
SOX1O00570 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.99□□□□□ -1.61
SOX1O00570 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.99□□□□□ -1.61
SOX1O00570 RNU6-85P-201ENST00000605989 107 ntBASIC4.99□□□□□ -1.61
SOX1O00570 SNORA51-201ENST00000606420 132 ntBASIC4.99□□□□□ -1.61
SOX1O00570 AL450472.3-201ENST00000615578 367 ntBASIC4.99□□□□□ -1.61
SOX1O00570 AL138721.1-201ENST00000616756 179 ntBASIC4.99□□□□□ -1.61
SOX1O00570 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SOX1O00570 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.99□□□□□ -1.61
SOX1O00570 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.99□□□□□ -1.61
SOX1O00570 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SOX1O00570 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SOX1O00570 EOGT-210ENST00000615922 1931 ntBASIC4.99□□□□□ -1.61
SOX1O00570 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SOX1O00570 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SOX1O00570 ZFRP1-201ENST00000457579 2970 ntBASIC4.98□□□□□ -1.61
SOX1O00570 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SOX1O00570 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.98□□□□□ -1.61
SOX1O00570 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SOX1O00570 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SOX1O00570 RNU6-288P-201ENST00000363690 104 ntBASIC4.98□□□□□ -1.61
SOX1O00570 RNU4-42P-201ENST00000364738 142 ntBASIC4.98□□□□□ -1.61
SOX1O00570 RNU6-1303P-201ENST00000364841 107 ntBASIC4.98□□□□□ -1.61
SOX1O00570 SNORA70.6-201ENST00000383934 134 ntBASIC4.98□□□□□ -1.61
SOX1O00570 Y_RNA.483-201ENST00000384380 101 ntBASIC4.98□□□□□ -1.61
SOX1O00570 RNU6-146P-201ENST00000384602 108 ntBASIC4.98□□□□□ -1.61
SOX1O00570 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.98□□□□□ -1.61
SOX1O00570 RPL21P90-201ENST00000415692 466 ntBASIC4.98□□□□□ -1.61
SOX1O00570 ELOCP20-201ENST00000422460 345 ntBASIC4.98□□□□□ -1.61
SOX1O00570 AL133396.1-201ENST00000432048 687 ntBASIC4.98□□□□□ -1.61
SOX1O00570 RPL7L1P1-201ENST00000448259 785 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms