Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 HMGN1P11-201ENST00000508668 303 ntBASIC3.78□□□□□ -1.8
CCDC187A0A096LP49 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC187A0A096LP49 Y_RNA.675-201ENST00000516389 149 ntBASIC3.78□□□□□ -1.8
CCDC187A0A096LP49 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC187A0A096LP49 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC187A0A096LP49 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC187A0A096LP49 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC187A0A096LP49 HMGB1P6-201ENST00000569046 646 ntBASIC3.78□□□□□ -1.8
CCDC187A0A096LP49 AL022099.1-201ENST00000604551 712 ntBASIC3.78□□□□□ -1.8
CCDC187A0A096LP49 AL161756.2-201ENST00000604597 246 ntBASIC3.78□□□□□ -1.8
CCDC187A0A096LP49 uc_338.32-201ENST00000615087 172 ntBASIC3.78□□□□□ -1.8
CCDC187A0A096LP49 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC187A0A096LP49 SNHG22-203ENST00000617833 660 ntBASIC3.78□□□□□ -1.8
CCDC187A0A096LP49 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.78□□□□□ -1.8
CCDC187A0A096LP49 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.78□□□□□ -1.8
CCDC187A0A096LP49 AC090574.1-201ENST00000623186 233 ntBASIC3.78□□□□□ -1.8
CCDC187A0A096LP49 MAPK10-253ENST00000641010 4072 ntBASIC3.78□□□□□ -1.8
CCDC187A0A096LP49 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CCDC187A0A096LP49 MAPK10-372ENST00000641954 3413 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 TAB3P1-202ENST00000452645 1634 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 RNU6-74P-201ENST00000384235 107 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AL136372.1-201ENST00000403060 228 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 RNU6-908P-201ENST00000410160 94 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 PDCL2P1-201ENST00000419302 352 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 ZNF90P2-204ENST00000419323 1075 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 MTND2P23-201ENST00000422990 651 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 OR2AS1P-201ENST00000427827 319 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 VDAC1P3-201ENST00000434069 851 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 HMGB3P12-201ENST00000438745 556 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 SNRPGP6-201ENST00000451124 220 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 SNORD97-201ENST00000459187 142 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AC008481.1-201ENST00000463278 396 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AC092451.1-201ENST00000480211 153 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 RPL36AP51-201ENST00000487216 318 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 RNU6-352P-201ENST00000516908 107 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AC093027.1-201ENST00000546698 429 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 YPEL5P3-201ENST00000547227 352 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AC007621.1-201ENST00000604544 437 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AL360085.1-201ENST00000604713 532 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AC007179.3-201ENST00000604976 235 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AC006023.2-201ENST00000609916 167 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AL132765.2-201ENST00000610812 351 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 AL160413.1-201ENST00000622780 310 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 MTND5P42-201ENST00000637720 498 ntBASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC187A0A096LP49 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 Y_RNA.22-201ENST00000362492 102 ntBASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 SNORA23-201ENST00000365128 182 ntBASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 RNU6-877P-201ENST00000383868 107 ntBASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 MIR1-2-201ENST00000384961 85 ntBASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 RNU2-37P-201ENST00000410695 177 ntBASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 AL139247.1-201ENST00000422768 325 ntBASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 AL513185.2-201ENST00000425543 193 ntBASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 TAAR7P-201ENST00000436141 242 ntBASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 RPL7P54-201ENST00000438336 674 ntBASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 RPS3AP12-201ENST00000443616 753 ntBASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 NIPA2P5-201ENST00000452282 464 ntBASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 RN7SL271P-201ENST00000487601 295 ntBASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 AC096576.1-201ENST00000489014 359 ntBASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 AC139783.2-201ENST00000504847 1145 ntBASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 AC004062.1-201ENST00000509926 645 ntBASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 RNU6-1281P-201ENST00000516223 105 ntBASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 HMGB1P41-201ENST00000520234 440 ntBASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 IGKV2D-19-201ENST00000523346 262 ntBASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC187A0A096LP49 AC107016.1-201ENST00000550463 337 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms