Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 TRAV37-201ENST00000553906 342 ntBASIC7.21□□□□□ -1.26
CCDC61Q9Y6R9 OR4H12P-201ENST00000556269 907 ntBASIC7.21□□□□□ -1.26
CCDC61Q9Y6R9 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC7.21□□□□□ -1.26
CCDC61Q9Y6R9 AC005046.1-201ENST00000608515 625 ntBASIC7.21□□□□□ -1.26
CCDC61Q9Y6R9 AP000550.3-201ENST00000637734 379 ntBASIC7.21□□□□□ -1.26
CCDC61Q9Y6R9 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC61Q9Y6R9 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC7.21□□□□□ -1.26
CCDC61Q9Y6R9 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC61Q9Y6R9 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.21□□□□□ -1.26
CCDC61Q9Y6R9 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
CCDC61Q9Y6R9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 GNAS-202ENST00000306090 477 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 RNA5SP455-201ENST00000365190 119 ntBASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 RNU6-17P-201ENST00000384245 107 ntBASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 RNU6-18P-201ENST00000384527 107 ntBASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 RNU2-22P-201ENST00000411266 212 ntBASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 AP000907.1-201ENST00000428428 510 ntBASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 uc_338.18-201ENST00000615451 175 ntBASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 MIR6864-201ENST00000617935 70 ntBASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 AL079305.1-201ENST00000623159 3008 ntBASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 AC140479.2-201ENST00000421567 3130 ntBASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC61Q9Y6R9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 AC239868.2-201ENST00000564237 4527 ntBASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 AL133482.1-201ENST00000415988 498 ntBASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 AL138785.1-201ENST00000425821 331 ntBASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 AL590399.4-201ENST00000436561 601 ntBASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 RPS29P10-201ENST00000439197 166 ntBASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 RPL34P20-201ENST00000442771 351 ntBASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 RPS29P33-201ENST00000456717 146 ntBASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 AC022493.1-201ENST00000492984 337 ntBASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 AL671862.1-201ENST00000515851 349 ntBASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 RN7SKP260-201ENST00000516907 149 ntBASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 Y_RNA.712-201ENST00000517011 92 ntBASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 AL139124.1-201ENST00000609123 421 ntBASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 MIR4275-201ENST00000636486 87 ntBASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 LARS-201ENST00000274562 2213 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC61Q9Y6R9 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 AC232271.1-201ENST00000602455 2715 ntBASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 Y_RNA.337-201ENST00000365312 102 ntBASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 RNU6-741P-201ENST00000383889 107 ntBASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 SNORA70.9-201ENST00000384370 135 ntBASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 SNORD37.2-201ENST00000391075 66 ntBASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 RNU1-139P-201ENST00000391307 165 ntBASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 UBA52P6-201ENST00000399822 382 ntBASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 FAR2P2-201ENST00000413041 594 ntBASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 BTF3P11-201ENST00000426582 477 ntBASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 AC005154.2-201ENST00000438110 379 ntBASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 RPL7L1P1-201ENST00000448259 785 ntBASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 RPL23AP45-201ENST00000476406 468 ntBASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 RN7SKP49-201ENST00000516675 260 ntBASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 MIR4330-201ENST00000579077 105 ntBASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 AC023575.1-201ENST00000580510 358 ntBASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 AC023043.3-201ENST00000593113 385 ntBASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC61Q9Y6R9 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.17□□□□□ -1.26
CCDC61Q9Y6R9 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms