Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 YWHAEP7-203ENST00000622054 312 ntBASIC3.43□□□□□ -1.86
PCDHGB1Q9Y5G3 AC112487.2-201ENST00000637950 304 ntBASIC3.43□□□□□ -1.86
PCDHGB1Q9Y5G3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGB1Q9Y5G3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDHGB1Q9Y5G3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PCDHGB1Q9Y5G3 AC073073.2-201ENST00000609827 2578 ntBASIC3.43□□□□□ -1.86
PCDHGB1Q9Y5G3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
PCDHGB1Q9Y5G3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGB1Q9Y5G3 RLIMP1-201ENST00000339626 1680 ntBASIC3.43□□□□□ -1.86
PCDHGB1Q9Y5G3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 Y_RNA.86-201ENST00000363020 111 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 SNORD56.2-201ENST00000363242 71 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 RNU6-1322P-201ENST00000364309 107 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 SNORA7.2-201ENST00000364446 145 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 RNU4-76P-201ENST00000364509 141 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 Y_RNA.263-201ENST00000364659 114 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 SNORA20.2-201ENST00000383922 131 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 RNU6-456P-201ENST00000384493 107 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 Y_RNA.535-201ENST00000384612 99 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 MIR607-201ENST00000385241 96 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 RNA5SP31-201ENST00000411144 127 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 OR9R1P-201ENST00000412200 877 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 AC007390.1-201ENST00000415722 356 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 SNRPEP10-201ENST00000420249 274 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 AC018644.1-201ENST00000429934 551 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 TXNP1-201ENST00000441872 371 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 RPL23AP33-201ENST00000442301 452 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 RPS11P1-201ENST00000451072 473 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 AC104308.1-201ENST00000454621 333 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 AP1S2P1-201ENST00000457344 379 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 SNORA40.12-201ENST00000516329 111 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 RNA5SP337-201ENST00000517007 109 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 AP003072.2-201ENST00000527756 676 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 AL359212.1-201ENST00000556608 614 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 AL138976.2-201ENST00000563989 694 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 RN7SL703P-201ENST00000578485 302 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 AC069200.1-201ENST00000609511 323 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 AC009161.2-201ENST00000624626 138 ntBASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGB1Q9Y5G3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 SNORA63.1-201ENST00000362493 131 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 RNA5SP42-201ENST00000364278 115 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 SNORA51.2-201ENST00000364595 132 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 RNA5SP97-201ENST00000365006 84 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 SNORD82-201ENST00000365530 70 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 AP002088.1-201ENST00000382740 395 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 SSXP10-201ENST00000402595 565 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 MRPL42P2-201ENST00000403169 426 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 SNORA11.2-201ENST00000408318 127 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 RNA5SP293-201ENST00000410527 113 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 AC012065.2-201ENST00000421295 375 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 AC006548.1-201ENST00000427470 102 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 AL445584.1-201ENST00000431451 330 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 RPL21P112-201ENST00000434403 463 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 AC127537.2-201ENST00000439258 465 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 USP9YP15-201ENST00000442391 422 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 AL136380.1-201ENST00000447970 162 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 snoU13.24-201ENST00000458998 104 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 AC079382.1-201ENST00000493346 557 ntBASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGB1Q9Y5G3 MTND3P22-201ENST00000510932 243 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms