Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 SAGE2P-201ENST00000420011 2126 ntBASIC9.12□□□□□ -0.95
SCAF1Q9H7N4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 RNU6-647P-201ENST00000364243 107 ntBASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 RNU6-821P-201ENST00000390995 107 ntBASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 MIR1302-5-201ENST00000408164 150 ntBASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 RPL12P46-201ENST00000436610 195 ntBASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 AC112498.1-201ENST00000444401 332 ntBASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 HMGB3P8-201ENST00000449709 577 ntBASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 snoU109.2-201ENST00000459316 135 ntBASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 RPL23AP70-201ENST00000483361 460 ntBASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 SNORA31.22-201ENST00000517204 135 ntBASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 AC074050.1-201ENST00000563247 211 ntBASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 SNORA74.4-201ENST00000607595 199 ntBASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 AC009831.4-201ENST00000620744 325 ntBASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 MTND5P18-201ENST00000445624 1801 ntBASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 AL021877.2-201ENST00000624442 10684 ntBASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SCAF1Q9H7N4 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 THAP12P5-201ENST00000405864 2275 ntBASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 RNU6-873P-201ENST00000363833 107 ntBASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 RNU6-597P-201ENST00000365620 102 ntBASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 MIR34A-201ENST00000385130 110 ntBASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 MIRLET7F2-201ENST00000385277 83 ntBASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 AL354868.1-201ENST00000417077 482 ntBASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 YPEL5P1-201ENST00000419731 367 ntBASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 AL589765.3-201ENST00000446084 462 ntBASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 AL671862.1-201ENST00000515851 349 ntBASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 AC091178.2-201ENST00000584401 117 ntBASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 AC015813.4-201ENST00000610469 179 ntBASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 AC007938.2-201ENST00000604666 2634 ntBASIC9.1□□□□□ -0.95
SCAF1Q9H7N4 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 RNU6-78P-201ENST00000362897 107 ntBASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 MIR526A2-201ENST00000390198 65 ntBASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 SDHDP6-201ENST00000414693 480 ntBASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 RPS4XP1-201ENST00000482189 787 ntBASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 RNU6-1198P-201ENST00000516904 67 ntBASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 VN1R85P-201ENST00000601587 426 ntBASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 Mico1.1-201ENST00000611698 204 ntBASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC9.09□□□□□ -0.95
SCAF1Q9H7N4 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 PARP4P2-201ENST00000446672 3326 ntBASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 RNA5SP110-201ENST00000362638 115 ntBASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 AL663061.1-201ENST00000416625 580 ntBASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 AC087588.1-201ENST00000462203 316 ntBASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 OR2AO1P-201ENST00000476497 403 ntBASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 AC106785.4-201ENST00000569492 412 ntBASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 AC245014.3-201ENST00000618589 347 ntBASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 AC022164.1-201ENST00000568767 2673 ntBASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC9.08□□□□□ -0.96
SCAF1Q9H7N4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms