Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 MIR6715A-201ENST00000615929 79 ntBASIC2.98□□□□□ -1.93
RPAP3Q9H6T3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.98□□□□□ -1.93
RPAP3Q9H6T3 AC011330.2-201ENST00000621680 635 ntBASIC2.98□□□□□ -1.93
RPAP3Q9H6T3 AC090772.4-201ENST00000623599 362 ntBASIC2.98□□□□□ -1.93
RPAP3Q9H6T3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.98□□□□□ -1.93
RPAP3Q9H6T3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
RPAP3Q9H6T3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.98□□□□□ -1.93
RPAP3Q9H6T3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.98□□□□□ -1.93
RPAP3Q9H6T3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.98□□□□□ -1.93
RPAP3Q9H6T3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 AC006378.2-201ENST00000623178 2476 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 SNORA70B-201ENST00000384210 135 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 SNORA36C-201ENST00000384289 132 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 RPS4XP7-201ENST00000406274 780 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 CCDC58P2-201ENST00000417131 366 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 MTCYBP38-201ENST00000417160 1123 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 USP9YP20-201ENST00000419224 558 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 AL592447.1-201ENST00000447592 540 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 AC009961.3-201ENST00000449832 765 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 AC010587.2-201ENST00000511727 448 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 RNU6-714P-201ENST00000516963 103 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 AP002770.2-201ENST00000543613 532 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 AC103810.1-201ENST00000579873 453 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 AC011451.2-201ENST00000604303 598 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 AC245517.5-201ENST00000611529 162 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 AL161629.2-201ENST00000615347 275 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 U4.3-201ENST00000621047 82 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 AC002550.2-201ENST00000621246 394 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 AP000776.1-201ENST00000530032 1663 ntBASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RPAP3Q9H6T3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
RPAP3Q9H6T3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 DEFB108F-201ENST00000344638 222 ntBASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 RNU6-1207P-201ENST00000384343 107 ntBASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 SNORA3.2-201ENST00000408221 125 ntBASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 SSR1P2-201ENST00000415208 787 ntBASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 ELOCP9-201ENST00000418624 239 ntBASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 GTF2IP9-201ENST00000502460 301 ntBASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 AC147055.4-201ENST00000504399 745 ntBASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 ANXA2P1-201ENST00000505539 926 ntBASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 OR5BM1P-201ENST00000512021 366 ntBASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 DEFB108D-201ENST00000527787 222 ntBASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 AC104984.5-201ENST00000586878 94 ntBASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 AC105224.1-201ENST00000587055 421 ntBASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 AL158042.1-201ENST00000605338 460 ntBASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 SNHG22-203ENST00000617833 660 ntBASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 AC022960.3-201ENST00000619794 441 ntBASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 MIR6733-201ENST00000635723 61 ntBASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RPAP3Q9H6T3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 MTCO1P9-201ENST00000505577 1534 ntBASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 RNU6-193P-201ENST00000410977 107 ntBASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 NPM1P11-201ENST00000417106 855 ntBASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 RPL7P37-201ENST00000425095 738 ntBASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 AL117351.1-201ENST00000438864 766 ntBASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 MTND3P1-201ENST00000441336 220 ntBASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 SNORD121B-201ENST00000458838 81 ntBASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 AP000852.1-201ENST00000472460 573 ntBASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 RPS15AP34-201ENST00000487776 387 ntBASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 AC093281.2-201ENST00000510153 597 ntBASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.95□□□□□ -1.94
RPAP3Q9H6T3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms