Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC007619.2-201ENST00000605743 379 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 AC008498.1-201ENST00000613012 531 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 AC140725.3-201ENST00000616193 880 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
POLR1EQ9GZS1 ASNSP3-201ENST00000451989 1306 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC011477.1-204ENST00000623416 1325 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 RNU4-92P-201ENST00000363783 136 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 RNU6-754P-201ENST00000391166 107 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AL122016.1-201ENST00000403365 367 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AL096701.2-201ENST00000416920 238 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC106883.1-201ENST00000418805 562 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 USP9YP24-201ENST00000434374 697 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 RPS15AP7-201ENST00000439294 405 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AL831737.1-201ENST00000441288 271 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 USP9YP17-201ENST00000444617 696 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 MRPL50P4-201ENST00000446432 475 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 USP9YP25-201ENST00000457708 443 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC103975.1-201ENST00000482506 483 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC096576.1-201ENST00000489014 359 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 RN7SKP132-201ENST00000516001 208 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 RNU6-826P-201ENST00000516827 104 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 NRON-201ENST00000517270 370 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC022634.1-201ENST00000520765 532 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC009712.1-201ENST00000564938 316 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC011471.1-201ENST00000585766 187 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 MTCO2P2-201ENST00000591258 225 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 NRBF2P5-201ENST00000603087 788 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 RPP40P2-201ENST00000603596 712 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AL033523.1-201ENST00000605153 153 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC090186.1-201ENST00000605991 572 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC080013.3-201ENST00000606839 578 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC009974.1-201ENST00000608881 455 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC245297.2-201ENST00000610119 565 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC099063.3-201ENST00000642066 185 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 AC106754.1-201ENST00000562632 1513 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 DDX43P2-201ENST00000604753 1354 ntBASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.71□□□□□ -1.98
POLR1EQ9GZS1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 RNU6-859P-201ENST00000362728 107 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 RNU6-223P-201ENST00000362830 107 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 RNU6-906P-201ENST00000384700 70 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 AL590084.2-201ENST00000401481 382 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 AL513331.1-201ENST00000411908 397 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 USP9YP33-201ENST00000412220 421 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 RPS25P9-201ENST00000435591 252 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 USP9YP35-201ENST00000435696 412 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 Z80107.1-201ENST00000436830 412 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 EEF1E1P1-201ENST00000446998 430 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 PTENP1-201ENST00000447117 1215 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 HMGB1P36-201ENST00000487709 576 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 AC105252.1-201ENST00000503089 286 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 AC034159.1-201ENST00000513885 583 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 RNA5SP76-201ENST00000516277 87 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 AF038458.1-201ENST00000588406 262 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 VN1R92P-201ENST00000598511 928 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 MTND4LP5-201ENST00000605152 292 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 AC024933.1-201ENST00000608472 348 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 AC024560.3-201ENST00000608482 349 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 AC245517.5-201ENST00000611529 162 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 SDR42E1P2-201ENST00000614861 481 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 SNHG22-203ENST00000617833 660 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms