Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC2.72□□□□□ -1.97
LITAFQ99732 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC2.72□□□□□ -1.97
LITAFQ99732 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 RPL23AP87-202ENST00000573039 466 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 MIR4330-201ENST00000579077 105 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.72□□□□□ -1.97
LITAFQ99732 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.72□□□□□ -1.97
LITAFQ99732 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LITAFQ99732 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC2.72□□□□□ -1.97
LITAFQ99732 AC022893.3-201ENST00000607665 437 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 AL391261.4-201ENST00000616012 481 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 AL360181.4-201ENST00000621752 134 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
LITAFQ99732 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LITAFQ99732 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
LITAFQ99732 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LITAFQ99732 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
LITAFQ99732 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
LITAFQ99732 AC012618.3-205ENST00000637896 1496 ntBASIC2.71□□□□□ -1.97
LITAFQ99732 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.71□□□□□ -1.97
LITAFQ99732 SDAD1P2-201ENST00000441308 2028 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LITAFQ99732 RNU6-715P-201ENST00000365204 103 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.71□□□□□ -1.98
LITAFQ99732 Y_RNA.387-201ENST00000383918 102 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 Y_RNA.399-201ENST00000383955 105 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
LITAFQ99732 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
LITAFQ99732 RNA5SP397-201ENST00000391323 118 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 RPS12P24-201ENST00000412619 387 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 AL160275.3-201ENST00000423876 471 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 AL157831.1-201ENST00000426134 473 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 AL669831.1-202ENST00000428504 417 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 SAR1AP4-201ENST00000429225 591 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.71□□□□□ -1.98
LITAFQ99732 HMGB1P27-201ENST00000431429 603 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 AL591704.1-201ENST00000432574 275 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 GTF2IP13-201ENST00000438487 386 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.71□□□□□ -1.98
LITAFQ99732 PRDX3P3-201ENST00000447765 522 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 EIF4EBP2P1-201ENST00000450009 343 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 DYNLL1P5-201ENST00000467158 270 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 AC092324.1-201ENST00000468671 324 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 AC092451.1-201ENST00000480211 153 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 RN7SL271P-201ENST00000487601 295 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.71□□□□□ -1.98
LITAFQ99732 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC2.71□□□□□ -1.98
LITAFQ99732 Y_RNA.682-201ENST00000516457 100 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 RNA5SP73-201ENST00000516744 108 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 RNU6-273P-201ENST00000516937 96 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.71□□□□□ -1.98
LITAFQ99732 AP000889.2-201ENST00000532684 490 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 SNRPGP16-201ENST00000533275 226 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC2.71□□□□□ -1.98
LITAFQ99732 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.71□□□□□ -1.98
LITAFQ99732 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.71□□□□□ -1.98
LITAFQ99732 AC090115.3-201ENST00000553218 849 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.71□□□□□ -1.98
LITAFQ99732 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.71□□□□□ -1.98
LITAFQ99732 MIR3667-201ENST00000581025 74 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.71□□□□□ -1.98
LITAFQ99732 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.71□□□□□ -1.98
LITAFQ99732 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC2.71□□□□□ -1.98
LITAFQ99732 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC2.71□□□□□ -1.98
LITAFQ99732 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.71□□□□□ -1.98
LITAFQ99732 U2.17-201ENST00000611454 95 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.71□□□□□ -1.98
LITAFQ99732 AC004825.2-201ENST00000616634 455 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 AL445363.3-201ENST00000623080 671 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 AC006504.1-201ENST00000562493 3666 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
LITAFQ99732 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LITAFQ99732 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LITAFQ99732 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.71□□□□□ -1.98
LITAFQ99732 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LITAFQ99732 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LITAFQ99732 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.71□□□□□ -1.98
LITAFQ99732 AC006971.1-201ENST00000407916 4486 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 INTS6P1-201ENST00000504674 2530 ntBASIC2.71□□□□□ -1.98
LITAFQ99732 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
LITAFQ99732 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.7□□□□□ -1.98
LITAFQ99732 AC139713.2-214ENST00000642059 1811 ntBASIC2.7□□□□□ -1.98
LITAFQ99732 AC010733.2-201ENST00000589496 5702 ntBASIC2.7□□□□□ -1.98
LITAFQ99732 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.7□□□□□ -1.98
LITAFQ99732 MFSD8-242ENST00000641690 4199 ntBASIC2.7□□□□□ -1.98
LITAFQ99732 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
LITAFQ99732 MAPK10-372ENST00000641954 3413 ntBASIC2.7□□□□□ -1.98
LITAFQ99732 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LITAFQ99732 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LITAFQ99732 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC2.7□□□□□ -1.98
LITAFQ99732 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC2.7□□□□□ -1.98
LITAFQ99732 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC2.7□□□□□ -1.98
LITAFQ99732 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LITAFQ99732 DEFB108F-201ENST00000344638 222 ntBASIC2.7□□□□□ -1.98
LITAFQ99732 RNA5SP123-201ENST00000363244 119 ntBASIC2.7□□□□□ -1.98
LITAFQ99732 RNU6-254P-201ENST00000363377 107 ntBASIC2.7□□□□□ -1.98
LITAFQ99732 U8.4-201ENST00000363626 134 ntBASIC2.7□□□□□ -1.98
LITAFQ99732 RNA5SP242-201ENST00000364171 118 ntBASIC2.7□□□□□ -1.98
LITAFQ99732 Y_RNA.339-201ENST00000365325 102 ntBASIC2.7□□□□□ -1.98
LITAFQ99732 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms