Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CD47Q08722 RPL27AP5-201ENST00000469428 449 ntBASIC2.64□□□□□ -1.99
CD47Q08722 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.64□□□□□ -1.99
CD47Q08722 AC117440.1-201ENST00000474107 571 ntBASIC2.64□□□□□ -1.99
CD47Q08722 AC135721.1-201ENST00000497954 479 ntBASIC2.64□□□□□ -1.99
CD47Q08722 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.64□□□□□ -1.99
CD47Q08722 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CD47Q08722 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.64□□□□□ -1.99
CD47Q08722 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.64□□□□□ -1.99
CD47Q08722 AC022483.1-201ENST00000514020 567 ntBASIC2.64□□□□□ -1.99
CD47Q08722 AC008885.1-201ENST00000514930 301 ntBASIC2.64□□□□□ -1.99
CD47Q08722 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.64□□□□□ -1.99
CD47Q08722 AC026801.2-201ENST00000515352 425 ntBASIC2.64□□□□□ -1.99
CD47Q08722 SNORA70.16-201ENST00000516390 95 ntBASIC2.64□□□□□ -1.99
CD47Q08722 SCARNA13-201ENST00000516672 275 ntBASIC2.64□□□□□ -1.99
CD47Q08722 RNU6-826P-201ENST00000516827 104 ntBASIC2.64□□□□□ -1.99
CD47Q08722 AC025881.1-201ENST00000518851 512 ntBASIC2.64□□□□□ -1.99
CD47Q08722 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.64□□□□□ -1.99
CD47Q08722 FAM60DP-201ENST00000524174 632 ntBASIC2.64□□□□□ -1.99
CD47Q08722 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.64□□□□□ -1.99
CD47Q08722 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.64□□□□□ -1.99
CD47Q08722 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.64□□□□□ -1.99
CD47Q08722 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CD47Q08722 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.64□□□□□ -1.99
CD47Q08722 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.64□□□□□ -1.99
CD47Q08722 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.64□□□□□ -1.99
CD47Q08722 AL355836.1-201ENST00000555951 870 ntBASIC2.64□□□□□ -1.99
CD47Q08722 ZNF519P3-201ENST00000557158 1032 ntBASIC2.64□□□□□ -1.99
CD47Q08722 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.64□□□□□ -1.99
CD47Q08722 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.64□□□□□ -1.99
CD47Q08722 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.64□□□□□ -1.99
CD47Q08722 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.64□□□□□ -1.99
CD47Q08722 MTCO3P24-201ENST00000572729 782 ntBASIC2.64□□□□□ -1.99
CD47Q08722 AC005951.2-201ENST00000576282 495 ntBASIC2.64□□□□□ -1.99
CD47Q08722 AP005136.1-201ENST00000579765 429 ntBASIC2.64□□□□□ -1.99
CD47Q08722 SNORD84-203ENST00000584275 78 ntBASIC2.64□□□□□ -1.99
CD47Q08722 AC110760.3-201ENST00000598794 467 ntBASIC2.64□□□□□ -1.99
CD47Q08722 AC012065.4-201ENST00000602445 679 ntBASIC2.64□□□□□ -1.99
CD47Q08722 AC112187.2-201ENST00000604345 283 ntBASIC2.64□□□□□ -1.99
CD47Q08722 AP000787.2-201ENST00000604432 568 ntBASIC2.64□□□□□ -1.99
CD47Q08722 AC005046.1-201ENST00000608515 625 ntBASIC2.64□□□□□ -1.99
CD47Q08722 AL110115.1-201ENST00000614396 364 ntBASIC2.64□□□□□ -1.99
CD47Q08722 MIR6130-201ENST00000619419 109 ntBASIC2.64□□□□□ -1.99
CD47Q08722 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.64□□□□□ -1.99
CD47Q08722 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.64□□□□□ -1.99
CD47Q08722 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.64□□□□□ -1.99
CD47Q08722 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.63□□□□□ -1.99
CD47Q08722 Z82195.2-201ENST00000612348 18351 ntBASIC2.63□□□□□ -1.99
CD47Q08722 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CD47Q08722 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CD47Q08722 MIR19A-201ENST00000384878 82 ntBASIC2.63□□□□□ -1.99
CD47Q08722 AC090960.1-201ENST00000421072 306 ntBASIC2.63□□□□□ -1.99
CD47Q08722 CYCSP46-201ENST00000423569 204 ntBASIC2.63□□□□□ -1.99
CD47Q08722 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.63□□□□□ -1.99
CD47Q08722 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.63□□□□□ -1.99
CD47Q08722 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.63□□□□□ -1.99
CD47Q08722 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.63□□□□□ -1.99
CD47Q08722 UBE2V1P13-201ENST00000436983 439 ntBASIC2.63□□□□□ -1.99
CD47Q08722 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.63□□□□□ -1.99
CD47Q08722 MTND2P4-201ENST00000445034 1004 ntBASIC2.63□□□□□ -1.99
CD47Q08722 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.63□□□□□ -1.99
CD47Q08722 COX6CP12-201ENST00000446748 202 ntBASIC2.63□□□□□ -1.99
CD47Q08722 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.63□□□□□ -1.99
CD47Q08722 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.63□□□□□ -1.99
CD47Q08722 AC008571.1-201ENST00000467232 300 ntBASIC2.63□□□□□ -1.99
CD47Q08722 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.63□□□□□ -1.99
CD47Q08722 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.63□□□□□ -1.99
CD47Q08722 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.63□□□□□ -1.99
CD47Q08722 SNORA9.3-201ENST00000516383 129 ntBASIC2.63□□□□□ -1.99
CD47Q08722 Y_RNA.688-201ENST00000516565 95 ntBASIC2.63□□□□□ -1.99
CD47Q08722 RNA5SP468-201ENST00000516782 93 ntBASIC2.63□□□□□ -1.99
CD47Q08722 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.63□□□□□ -1.99
CD47Q08722 DEFB108D-201ENST00000527787 222 ntBASIC2.63□□□□□ -1.99
CD47Q08722 AP002748.2-201ENST00000528671 348 ntBASIC2.63□□□□□ -1.99
CD47Q08722 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.63□□□□□ -1.99
CD47Q08722 AC123904.2-201ENST00000548059 300 ntBASIC2.63□□□□□ -1.99
CD47Q08722 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.63□□□□□ -1.99
CD47Q08722 AF131215.7-201ENST00000602443 707 ntBASIC2.63□□□□□ -1.99
CD47Q08722 AC015871.2-201ENST00000603605 948 ntBASIC2.63□□□□□ -1.99
CD47Q08722 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.63□□□□□ -1.99
CD47Q08722 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CD47Q08722 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CD47Q08722 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CD47Q08722 RNU6-173P-201ENST00000364215 104 ntBASIC2.62□□□□□ -1.99
CD47Q08722 SNORA9.2-201ENST00000365361 133 ntBASIC2.62□□□□□ -1.99
CD47Q08722 RNU6-533P-201ENST00000384144 107 ntBASIC2.62□□□□□ -1.99
CD47Q08722 SNORA54-201ENST00000384281 123 ntBASIC2.62□□□□□ -1.99
CD47Q08722 MIR1302-8-201ENST00000408342 128 ntBASIC2.62□□□□□ -1.99
CD47Q08722 RN7SKP220-201ENST00000410611 288 ntBASIC2.62□□□□□ -1.99
CD47Q08722 RNU6-516P-201ENST00000411381 104 ntBASIC2.62□□□□□ -1.99
CD47Q08722 USP9YP13-201ENST00000417797 480 ntBASIC2.62□□□□□ -1.99
CD47Q08722 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.62□□□□□ -1.99
CD47Q08722 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.62□□□□□ -1.99
CD47Q08722 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.62□□□□□ -1.99
CD47Q08722 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.62□□□□□ -1.99
CD47Q08722 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.62□□□□□ -1.99
CD47Q08722 AL049734.2-201ENST00000441066 616 ntBASIC2.62□□□□□ -1.99
CD47Q08722 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.62□□□□□ -1.99
CD47Q08722 RPL17P49-201ENST00000443728 411 ntBASIC2.62□□□□□ -1.99
CD47Q08722 BMI1P1-201ENST00000445879 941 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms