Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CDH12P55289 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH12P55289 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH12P55289 AC006020.1-201ENST00000420179 1854 ntBASIC3.41□□□□□ -1.86
CDH12P55289 CKAP2P1-201ENST00000555477 2049 ntBASIC3.41□□□□□ -1.86
CDH12P55289 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CDH12P55289 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CDH12P55289 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CDH12P55289 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
CDH12P55289 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
CDH12P55289 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CDH12P55289 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CDH12P55289 AC073343.1-201ENST00000328239 651 ntBASIC3.4□□□□□ -1.87
CDH12P55289 RNU6-960P-201ENST00000364056 120 ntBASIC3.4□□□□□ -1.87
CDH12P55289 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDH12P55289 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDH12P55289 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH12P55289 MIR184-201ENST00000384962 84 ntBASIC3.4□□□□□ -1.87
CDH12P55289 SOD2P1-201ENST00000396543 562 ntBASIC3.4□□□□□ -1.87
CDH12P55289 TXNP7-201ENST00000406296 293 ntBASIC3.4□□□□□ -1.87
CDH12P55289 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDH12P55289 EI24P1-201ENST00000416584 867 ntBASIC3.4□□□□□ -1.87
CDH12P55289 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH12P55289 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH12P55289 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH12P55289 DDX3P2-201ENST00000446138 111 ntBASIC3.4□□□□□ -1.87
CDH12P55289 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDH12P55289 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.4□□□□□ -1.87
CDH12P55289 ANP32BP2-201ENST00000454525 545 ntBASIC3.4□□□□□ -1.87
CDH12P55289 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH12P55289 RNU6-261P-201ENST00000459506 102 ntBASIC3.4□□□□□ -1.87
CDH12P55289 AC004801.2-202ENST00000463559 283 ntBASIC3.4□□□□□ -1.87
CDH12P55289 AP000873.1-201ENST00000463987 400 ntBASIC3.4□□□□□ -1.87
CDH12P55289 FCF1P3-201ENST00000496394 590 ntBASIC3.4□□□□□ -1.87
CDH12P55289 AC026784.1-201ENST00000507986 352 ntBASIC3.4□□□□□ -1.87
CDH12P55289 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH12P55289 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH12P55289 PCBP2P3-201ENST00000509726 843 ntBASIC3.4□□□□□ -1.87
CDH12P55289 RNU6-390P-201ENST00000516259 103 ntBASIC3.4□□□□□ -1.87
CDH12P55289 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH12P55289 OR5BN1P-201ENST00000532955 829 ntBASIC3.4□□□□□ -1.87
CDH12P55289 AL157700.1-201ENST00000561973 1432 ntBASIC3.4□□□□□ -1.87
CDH12P55289 MIR4775-201ENST00000581168 75 ntBASIC3.4□□□□□ -1.87
CDH12P55289 SNORD84-203ENST00000584275 78 ntBASIC3.4□□□□□ -1.87
CDH12P55289 AP001029.3-201ENST00000588063 596 ntBASIC3.4□□□□□ -1.87
CDH12P55289 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH12P55289 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH12P55289 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH12P55289 AC010591.1-201ENST00000603941 649 ntBASIC3.4□□□□□ -1.87
CDH12P55289 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH12P55289 AL035413.2-201ENST00000604801 525 ntBASIC3.4□□□□□ -1.87
CDH12P55289 RMST_3.1-201ENST00000611651 109 ntBASIC3.4□□□□□ -1.87
CDH12P55289 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH12P55289 AL354950.2-201ENST00000617939 290 ntBASIC3.4□□□□□ -1.87
CDH12P55289 FP236240.3-201ENST00000623061 327 ntBASIC3.4□□□□□ -1.87
CDH12P55289 RNA5SP196-201ENST00000625967 102 ntBASIC3.4□□□□□ -1.87
CDH12P55289 MIR3662-201ENST00000637030 95 ntBASIC3.4□□□□□ -1.87
CDH12P55289 AL732372.2-225ENST00000642124 456 ntBASIC3.4□□□□□ -1.87
CDH12P55289 PWAR6-201ENST00000552334 4618 ntBASIC3.4□□□□□ -1.87
CDH12P55289 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDH12P55289 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH12P55289 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH12P55289 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.39□□□□□ -1.87
CDH12P55289 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CDH12P55289 SNORA62.1-201ENST00000364287 154 ntBASIC3.39□□□□□ -1.87
CDH12P55289 RNU6-867P-201ENST00000364956 107 ntBASIC3.39□□□□□ -1.87
CDH12P55289 SMIM11P1-201ENST00000369586 178 ntBASIC3.39□□□□□ -1.87
CDH12P55289 SNORA36C-201ENST00000384289 132 ntBASIC3.39□□□□□ -1.87
CDH12P55289 RNU6-1068P-201ENST00000410958 103 ntBASIC3.39□□□□□ -1.87
CDH12P55289 ZNF90P2-204ENST00000419323 1075 ntBASIC3.39□□□□□ -1.87
CDH12P55289 AL139413.1-201ENST00000421309 217 ntBASIC3.39□□□□□ -1.87
CDH12P55289 RAC1P6-201ENST00000423911 575 ntBASIC3.39□□□□□ -1.87
CDH12P55289 DUTP6-201ENST00000425573 462 ntBASIC3.39□□□□□ -1.87
CDH12P55289 RSL24D1P6-201ENST00000426934 401 ntBASIC3.39□□□□□ -1.87
CDH12P55289 USP12PX-201ENST00000432383 1057 ntBASIC3.39□□□□□ -1.87
CDH12P55289 SEPT14P3-201ENST00000439401 183 ntBASIC3.39□□□□□ -1.87
CDH12P55289 MTCO3P18-201ENST00000440206 761 ntBASIC3.39□□□□□ -1.87
CDH12P55289 AL732372.2-207ENST00000445840 183 ntBASIC3.39□□□□□ -1.87
CDH12P55289 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH12P55289 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.39□□□□□ -1.87
CDH12P55289 SEPT14P2-201ENST00000453405 183 ntBASIC3.39□□□□□ -1.87
CDH12P55289 RPS29P15-201ENST00000458329 171 ntBASIC3.39□□□□□ -1.87
CDH12P55289 AC078785.3-201ENST00000476607 425 ntBASIC3.39□□□□□ -1.87
CDH12P55289 VN1R105P-201ENST00000486595 910 ntBASIC3.39□□□□□ -1.87
CDH12P55289 AC078918.1-201ENST00000498515 228 ntBASIC3.39□□□□□ -1.87
CDH12P55289 MLLT10P2-201ENST00000506434 249 ntBASIC3.39□□□□□ -1.87
CDH12P55289 AC117522.1-201ENST00000509821 380 ntBASIC3.39□□□□□ -1.87
CDH12P55289 SEPT14P4-201ENST00000513445 186 ntBASIC3.39□□□□□ -1.87
CDH12P55289 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH12P55289 RNA5SP401-201ENST00000515920 127 ntBASIC3.39□□□□□ -1.87
CDH12P55289 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH12P55289 ERHP1-201ENST00000523006 310 ntBASIC3.39□□□□□ -1.87
CDH12P55289 FO082796.1-201ENST00000523795 183 ntBASIC3.39□□□□□ -1.87
CDH12P55289 AC109635.4-202ENST00000531666 412 ntBASIC3.39□□□□□ -1.87
CDH12P55289 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.39□□□□□ -1.87
CDH12P55289 AC093012.1-202ENST00000549403 582 ntBASIC3.39□□□□□ -1.87
CDH12P55289 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH12P55289 HIF1AP1-201ENST00000553642 175 ntBASIC3.39□□□□□ -1.87
CDH12P55289 AC055876.1-202ENST00000567053 138 ntBASIC3.39□□□□□ -1.87
CDH12P55289 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms