Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AL161729.4-201ENST00000604650 476 ntBASIC2.31□□□□□ -2.04
RFC3P40938 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.31□□□□□ -2.04
RFC3P40938 AC116312.1-201ENST00000606841 314 ntBASIC2.31□□□□□ -2.04
RFC3P40938 BX664608.1-201ENST00000610519 487 ntBASIC2.31□□□□□ -2.04
RFC3P40938 AL137847.3-201ENST00000611521 109 ntBASIC2.31□□□□□ -2.04
RFC3P40938 AC079395.3-201ENST00000615161 484 ntBASIC2.31□□□□□ -2.04
RFC3P40938 AC123767.1-202ENST00000620407 817 ntBASIC2.31□□□□□ -2.04
RFC3P40938 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RFC3P40938 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.31□□□□□ -2.04
RFC3P40938 AC093536.2-201ENST00000565257 1406 ntBASIC2.31□□□□□ -2.04
RFC3P40938 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RFC3P40938 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RFC3P40938 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
RFC3P40938 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RFC3P40938 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RFC3P40938 RNU6-1078P-201ENST00000364522 103 ntBASIC2.3□□□□□ -2.04
RFC3P40938 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.3□□□□□ -2.04
RFC3P40938 OOSP1P1-201ENST00000423265 274 ntBASIC2.3□□□□□ -2.04
RFC3P40938 GTF2IP20-201ENST00000431663 360 ntBASIC2.3□□□□□ -2.04
RFC3P40938 GTF2IP3-201ENST00000433887 494 ntBASIC2.3□□□□□ -2.04
RFC3P40938 RPS15AP7-201ENST00000439294 405 ntBASIC2.3□□□□□ -2.04
RFC3P40938 AC009296.1-201ENST00000443146 155 ntBASIC2.3□□□□□ -2.04
RFC3P40938 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.3□□□□□ -2.04
RFC3P40938 RPS15AP27-201ENST00000449183 343 ntBASIC2.3□□□□□ -2.04
RFC3P40938 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.3□□□□□ -2.04
RFC3P40938 AP1S2P1-201ENST00000457344 379 ntBASIC2.3□□□□□ -2.04
RFC3P40938 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.3□□□□□ -2.04
RFC3P40938 RPS20P20-201ENST00000460498 340 ntBASIC2.3□□□□□ -2.04
RFC3P40938 AC126182.1-201ENST00000478134 357 ntBASIC2.3□□□□□ -2.04
RFC3P40938 AC138853.1-201ENST00000503549 823 ntBASIC2.3□□□□□ -2.04
RFC3P40938 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.3□□□□□ -2.04
RFC3P40938 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.3□□□□□ -2.04
RFC3P40938 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.3□□□□□ -2.04
RFC3P40938 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.3□□□□□ -2.04
RFC3P40938 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.3□□□□□ -2.04
RFC3P40938 SUB1P1-201ENST00000524415 382 ntBASIC2.3□□□□□ -2.04
RFC3P40938 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.3□□□□□ -2.04
RFC3P40938 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.3□□□□□ -2.04
RFC3P40938 GLYCAM1-201ENST00000546596 285 ntBASIC2.3□□□□□ -2.04
RFC3P40938 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RFC3P40938 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.3□□□□□ -2.04
RFC3P40938 AL391261.3-201ENST00000557194 520 ntBASIC2.3□□□□□ -2.04
RFC3P40938 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.3□□□□□ -2.04
RFC3P40938 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.3□□□□□ -2.04
RFC3P40938 AC090616.3-201ENST00000582184 217 ntBASIC2.3□□□□□ -2.04
RFC3P40938 AL353997.4-201ENST00000586196 166 ntBASIC2.3□□□□□ -2.04
RFC3P40938 OR1M4P-201ENST00000589199 287 ntBASIC2.3□□□□□ -2.04
RFC3P40938 AC005498.1-201ENST00000592125 465 ntBASIC2.3□□□□□ -2.04
RFC3P40938 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.3□□□□□ -2.04
RFC3P40938 AC104985.3-201ENST00000623479 597 ntBASIC2.3□□□□□ -2.04
RFC3P40938 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.3□□□□□ -2.04
RFC3P40938 CR381653.2-201ENST00000624041 768 ntBASIC2.3□□□□□ -2.04
RFC3P40938 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.3□□□□□ -2.04
RFC3P40938 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.3□□□□□ -2.04
RFC3P40938 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
RFC3P40938 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
RFC3P40938 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RFC3P40938 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.29□□□□□ -2.04
RFC3P40938 SNORA68.1-201ENST00000364537 132 ntBASIC2.29□□□□□ -2.04
RFC3P40938 RNU6-637P-201ENST00000384050 107 ntBASIC2.29□□□□□ -2.04
RFC3P40938 MIR27B-201ENST00000385129 97 ntBASIC2.29□□□□□ -2.04
RFC3P40938 RNU6-298P-201ENST00000390888 96 ntBASIC2.29□□□□□ -2.04
RFC3P40938 U3.20-201ENST00000390909 217 ntBASIC2.29□□□□□ -2.04
RFC3P40938 RSL24D1P4-201ENST00000400938 484 ntBASIC2.29□□□□□ -2.04
RFC3P40938 AL590084.1-201ENST00000407885 387 ntBASIC2.29□□□□□ -2.04
RFC3P40938 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.29□□□□□ -2.04
RFC3P40938 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.29□□□□□ -2.04
RFC3P40938 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.29□□□□□ -2.04
RFC3P40938 RPL7P36-201ENST00000444633 681 ntBASIC2.29□□□□□ -2.04
RFC3P40938 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.29□□□□□ -2.04
RFC3P40938 MTND1P9-201ENST00000453775 944 ntBASIC2.29□□□□□ -2.04
RFC3P40938 RPL30P9-201ENST00000465586 330 ntBASIC2.29□□□□□ -2.04
RFC3P40938 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.29□□□□□ -2.04
RFC3P40938 ANXA2P1-201ENST00000505539 926 ntBASIC2.29□□□□□ -2.04
RFC3P40938 CDC42P4-201ENST00000510507 563 ntBASIC2.29□□□□□ -2.04
RFC3P40938 MRPS36P2-201ENST00000512569 299 ntBASIC2.29□□□□□ -2.04
RFC3P40938 AC109329.2-201ENST00000519658 482 ntBASIC2.29□□□□□ -2.04
RFC3P40938 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.29□□□□□ -2.04
RFC3P40938 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
RFC3P40938 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.29□□□□□ -2.04
RFC3P40938 OR6C7P-201ENST00000547875 934 ntBASIC2.29□□□□□ -2.04
RFC3P40938 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.29□□□□□ -2.04
RFC3P40938 MYL12BP1-201ENST00000569826 507 ntBASIC2.29□□□□□ -2.04
RFC3P40938 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.29□□□□□ -2.04
RFC3P40938 BBIP1P1-201ENST00000602999 279 ntBASIC2.29□□□□□ -2.04
RFC3P40938 AC104763.3-201ENST00000613765 618 ntBASIC2.29□□□□□ -2.04
RFC3P40938 AL158163.2-201ENST00000619110 700 ntBASIC2.29□□□□□ -2.04
RFC3P40938 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.29□□□□□ -2.04
RFC3P40938 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.29□□□□□ -2.04
RFC3P40938 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.29□□□□□ -2.04
RFC3P40938 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.29□□□□□ -2.04
RFC3P40938 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
RFC3P40938 AL161781.1-201ENST00000354277 403 ntBASIC2.28□□□□□ -2.04
RFC3P40938 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.28□□□□□ -2.04
RFC3P40938 MIR518C-201ENST00000384822 101 ntBASIC2.28□□□□□ -2.04
RFC3P40938 MIR144-201ENST00000384886 86 ntBASIC2.28□□□□□ -2.04
RFC3P40938 SNORA40.4-201ENST00000390971 128 ntBASIC2.28□□□□□ -2.04
RFC3P40938 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.28□□□□□ -2.04
RFC3P40938 TIMM9P2-201ENST00000419324 266 ntBASIC2.28□□□□□ -2.04
RFC3P40938 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms