Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.18□□□□□ -1.58
GPC1P35052 AC025755.1-201ENST00000521306 278 ntBASIC5.18□□□□□ -1.58
GPC1P35052 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.18□□□□□ -1.58
GPC1P35052 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.18□□□□□ -1.58
GPC1P35052 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.18□□□□□ -1.58
GPC1P35052 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.18□□□□□ -1.58
GPC1P35052 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.18□□□□□ -1.58
GPC1P35052 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.18□□□□□ -1.58
GPC1P35052 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.18□□□□□ -1.58
GPC1P35052 PCAT14-202ENST00000627127 3935 ntBASIC5.18□□□□□ -1.58
GPC1P35052 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
GPC1P35052 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.18□□□□□ -1.58
GPC1P35052 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.17□□□□□ -1.58
GPC1P35052 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
GPC1P35052 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
GPC1P35052 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.17□□□□□ -1.58
GPC1P35052 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
GPC1P35052 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
GPC1P35052 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
GPC1P35052 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
GPC1P35052 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
GPC1P35052 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
GPC1P35052 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.17□□□□□ -1.58
GPC1P35052 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
GPC1P35052 AC092376.2-201ENST00000622621 4116 ntBASIC5.17□□□□□ -1.58
GPC1P35052 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
GPC1P35052 SNORA25.1-201ENST00000362326 128 ntBASIC5.17□□□□□ -1.58
GPC1P35052 RNU6-1301P-201ENST00000362724 104 ntBASIC5.17□□□□□ -1.58
GPC1P35052 RNU6-918P-201ENST00000391219 106 ntBASIC5.17□□□□□ -1.58
GPC1P35052 U3.39-201ENST00000408569 239 ntBASIC5.17□□□□□ -1.58
GPC1P35052 RNU4-30P-201ENST00000410245 143 ntBASIC5.17□□□□□ -1.58
GPC1P35052 RNU6-1025P-201ENST00000410629 104 ntBASIC5.17□□□□□ -1.58
GPC1P35052 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.17□□□□□ -1.58
GPC1P35052 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.17□□□□□ -1.58
GPC1P35052 AL117339.3-201ENST00000418733 162 ntBASIC5.17□□□□□ -1.58
GPC1P35052 AC007161.1-204ENST00000423039 460 ntBASIC5.17□□□□□ -1.58
GPC1P35052 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.17□□□□□ -1.58
GPC1P35052 AL356981.1-201ENST00000454879 684 ntBASIC5.17□□□□□ -1.58
GPC1P35052 RPS26P21-201ENST00000475397 348 ntBASIC5.17□□□□□ -1.58
GPC1P35052 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.17□□□□□ -1.58
GPC1P35052 RNU6-479P-201ENST00000516348 105 ntBASIC5.17□□□□□ -1.58
GPC1P35052 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.17□□□□□ -1.58
GPC1P35052 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.17□□□□□ -1.58
GPC1P35052 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.17□□□□□ -1.58
GPC1P35052 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.17□□□□□ -1.58
GPC1P35052 AC090617.3-201ENST00000573670 475 ntBASIC5.17□□□□□ -1.58
GPC1P35052 MIR7853-201ENST00000584820 132 ntBASIC5.17□□□□□ -1.58
GPC1P35052 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
GPC1P35052 SRGNP1-201ENST00000603392 451 ntBASIC5.17□□□□□ -1.58
GPC1P35052 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.17□□□□□ -1.58
GPC1P35052 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
GPC1P35052 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
GPC1P35052 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
GPC1P35052 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.17□□□□□ -1.58
GPC1P35052 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
GPC1P35052 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
GPC1P35052 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
GPC1P35052 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
GPC1P35052 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.17□□□□□ -1.58
GPC1P35052 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.17□□□□□ -1.58
GPC1P35052 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
GPC1P35052 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
GPC1P35052 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
GPC1P35052 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.16□□□□□ -1.58
GPC1P35052 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
GPC1P35052 Y_RNA.286-201ENST00000364813 102 ntBASIC5.16□□□□□ -1.58
GPC1P35052 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
GPC1P35052 SNORD63-201ENST00000384262 68 ntBASIC5.16□□□□□ -1.58
GPC1P35052 Y_RNA.569-201ENST00000384749 103 ntBASIC5.16□□□□□ -1.58
GPC1P35052 RNU6-1135P-201ENST00000411083 103 ntBASIC5.16□□□□□ -1.58
GPC1P35052 DPPA2P3-201ENST00000411853 655 ntBASIC5.16□□□□□ -1.58
GPC1P35052 AL592148.1-201ENST00000413568 445 ntBASIC5.16□□□□□ -1.58
GPC1P35052 OR6D1P-201ENST00000436165 939 ntBASIC5.16□□□□□ -1.58
GPC1P35052 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.16□□□□□ -1.58
GPC1P35052 AL031659.1-201ENST00000447075 539 ntBASIC5.16□□□□□ -1.58
GPC1P35052 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.16□□□□□ -1.58
GPC1P35052 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.16□□□□□ -1.58
GPC1P35052 AP001324.2-201ENST00000461163 319 ntBASIC5.16□□□□□ -1.58
GPC1P35052 RNU6-927P-201ENST00000516199 100 ntBASIC5.16□□□□□ -1.58
GPC1P35052 RNY3P16-201ENST00000516338 101 ntBASIC5.16□□□□□ -1.58
GPC1P35052 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.16□□□□□ -1.58
GPC1P35052 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.16□□□□□ -1.58
GPC1P35052 AC008121.1-201ENST00000603244 268 ntBASIC5.16□□□□□ -1.58
GPC1P35052 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.16□□□□□ -1.58
GPC1P35052 SNORD113-5-201ENST00000607261 78 ntBASIC5.16□□□□□ -1.58
GPC1P35052 AL161629.2-201ENST00000615347 275 ntBASIC5.16□□□□□ -1.58
GPC1P35052 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
GPC1P35052 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.16□□□□□ -1.58
GPC1P35052 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
GPC1P35052 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
GPC1P35052 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
GPC1P35052 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
GPC1P35052 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.16□□□□□ -1.58
GPC1P35052 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
GPC1P35052 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
GPC1P35052 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
GPC1P35052 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
GPC1P35052 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
GPC1P35052 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
GPC1P35052 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms