Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 MTND1P32-201ENST00000433043 938 ntBASIC2.55□□□□□ -2
SHMT2P34897 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.55□□□□□ -2
SHMT2P34897 AC092573.2-201ENST00000434546 243 ntBASIC2.55□□□□□ -2
SHMT2P34897 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.55□□□□□ -2
SHMT2P34897 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.55□□□□□ -2
SHMT2P34897 TAAR7P-201ENST00000436141 242 ntBASIC2.55□□□□□ -2
SHMT2P34897 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
SHMT2P34897 LSM1P1-201ENST00000438629 273 ntBASIC2.55□□□□□ -2
SHMT2P34897 SDAD1P2-201ENST00000441308 2028 ntBASIC2.55□□□□□ -2
SHMT2P34897 UBBP3-201ENST00000445497 241 ntBASIC2.55□□□□□ -2
SHMT2P34897 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.55□□□□□ -2
SHMT2P34897 AP000542.1-201ENST00000448473 371 ntBASIC2.55□□□□□ -2
SHMT2P34897 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.55□□□□□ -2
SHMT2P34897 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.55□□□□□ -2
SHMT2P34897 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.55□□□□□ -2
SHMT2P34897 AL049874.1-201ENST00000489560 388 ntBASIC2.55□□□□□ -2
SHMT2P34897 RPL30P5-201ENST00000494923 336 ntBASIC2.55□□□□□ -2
SHMT2P34897 RNA5SP216-201ENST00000516111 123 ntBASIC2.55□□□□□ -2
SHMT2P34897 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.55□□□□□ -2
SHMT2P34897 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.55□□□□□ -2
SHMT2P34897 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.55□□□□□ -2
SHMT2P34897 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.55□□□□□ -2
SHMT2P34897 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.55□□□□□ -2
SHMT2P34897 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.55□□□□□ -2
SHMT2P34897 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.55□□□□□ -2
SHMT2P34897 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.55□□□□□ -2
SHMT2P34897 AL391001.1-201ENST00000602747 715 ntBASIC2.55□□□□□ -2
SHMT2P34897 AC006023.1-201ENST00000603944 259 ntBASIC2.55□□□□□ -2
SHMT2P34897 AC013553.2-201ENST00000604244 589 ntBASIC2.55□□□□□ -2
SHMT2P34897 AL138880.2-201ENST00000616214 239 ntBASIC2.55□□□□□ -2
SHMT2P34897 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.55□□□□□ -2
SHMT2P34897 AC010297.1-201ENST00000623948 149 ntBASIC2.55□□□□□ -2
SHMT2P34897 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.55□□□□□ -2
SHMT2P34897 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.55□□□□□ -2
SHMT2P34897 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.55□□□□□ -2
SHMT2P34897 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SHMT2P34897 OR4G2P-202ENST00000641004 1759 ntBASIC2.54□□□□□ -2
SHMT2P34897 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.54□□□□□ -2
SHMT2P34897 ZNF876P-202ENST00000398732 1485 ntBASIC2.54□□□□□ -2
SHMT2P34897 SNORD62.1-201ENST00000362541 86 ntBASIC2.54□□□□□ -2
SHMT2P34897 RNU6-637P-201ENST00000384050 107 ntBASIC2.54□□□□□ -2
SHMT2P34897 AL139039.1-201ENST00000401900 692 ntBASIC2.54□□□□□ -2
SHMT2P34897 RPLP0P7-201ENST00000416050 667 ntBASIC2.54□□□□□ -2
SHMT2P34897 AL096701.2-201ENST00000416920 238 ntBASIC2.54□□□□□ -2
SHMT2P34897 HMGB1P49-201ENST00000418882 569 ntBASIC2.54□□□□□ -2
SHMT2P34897 AC083875.1-201ENST00000419509 405 ntBASIC2.54□□□□□ -2
SHMT2P34897 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.54□□□□□ -2
SHMT2P34897 AC234781.2-201ENST00000426370 994 ntBASIC2.54□□□□□ -2
SHMT2P34897 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.54□□□□□ -2
SHMT2P34897 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.54□□□□□ -2
SHMT2P34897 PAXBP1P1-201ENST00000449315 447 ntBASIC2.54□□□□□ -2
SHMT2P34897 AC009961.3-201ENST00000449832 765 ntBASIC2.54□□□□□ -2
SHMT2P34897 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.54□□□□□ -2
SHMT2P34897 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.54□□□□□ -2
SHMT2P34897 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.54□□□□□ -2
SHMT2P34897 AC093809.1-201ENST00000509155 340 ntBASIC2.54□□□□□ -2
SHMT2P34897 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
SHMT2P34897 TTC39CP1-201ENST00000512513 755 ntBASIC2.54□□□□□ -2
SHMT2P34897 MTCYBP43-201ENST00000513621 740 ntBASIC2.54□□□□□ -2
SHMT2P34897 AC025881.1-201ENST00000518851 512 ntBASIC2.54□□□□□ -2
SHMT2P34897 OR7K1P-201ENST00000546439 926 ntBASIC2.54□□□□□ -2
SHMT2P34897 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.54□□□□□ -2
SHMT2P34897 MIR3162-201ENST00000581818 82 ntBASIC2.54□□□□□ -2
SHMT2P34897 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.54□□□□□ -2
SHMT2P34897 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.54□□□□□ -2
SHMT2P34897 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.54□□□□□ -2
SHMT2P34897 RPL12P50-201ENST00000603116 116 ntBASIC2.54□□□□□ -2
SHMT2P34897 AC107952.2-201ENST00000606048 486 ntBASIC2.54□□□□□ -2
SHMT2P34897 BX664608.1-201ENST00000610519 487 ntBASIC2.54□□□□□ -2
SHMT2P34897 AL139418.1-201ENST00000613613 177 ntBASIC2.54□□□□□ -2
SHMT2P34897 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.54□□□□□ -2
SHMT2P34897 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SHMT2P34897 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.53□□□□□ -2
SHMT2P34897 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.53□□□□□ -2
SHMT2P34897 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SHMT2P34897 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.53□□□□□ -2
SHMT2P34897 AL672167.1-206ENST00000356293 943 ntBASIC2.53□□□□□ -2
SHMT2P34897 RNU6-433P-201ENST00000363216 104 ntBASIC2.53□□□□□ -2
SHMT2P34897 RNU6-931P-201ENST00000363850 107 ntBASIC2.53□□□□□ -2
SHMT2P34897 RNU1-100P-201ENST00000365255 165 ntBASIC2.53□□□□□ -2
SHMT2P34897 FO393413.1-201ENST00000402892 195 ntBASIC2.53□□□□□ -2
SHMT2P34897 RN7SKP266-201ENST00000410232 287 ntBASIC2.53□□□□□ -2
SHMT2P34897 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.53□□□□□ -2
SHMT2P34897 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.53□□□□□ -2
SHMT2P34897 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.53□□□□□ -2
SHMT2P34897 MTND1P9-201ENST00000453775 944 ntBASIC2.53□□□□□ -2
SHMT2P34897 AC027673.1-201ENST00000456245 405 ntBASIC2.53□□□□□ -2
SHMT2P34897 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.53□□□□□ -2
SHMT2P34897 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.53□□□□□ -2
SHMT2P34897 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.53□□□□□ -2
SHMT2P34897 AC119751.5-201ENST00000514077 770 ntBASIC2.53□□□□□ -2
SHMT2P34897 SCARNA15.2-201ENST00000516409 127 ntBASIC2.53□□□□□ -2
SHMT2P34897 RNU6-1256P-201ENST00000516539 103 ntBASIC2.53□□□□□ -2
SHMT2P34897 RNU5A-4P-201ENST00000516588 111 ntBASIC2.53□□□□□ -2
SHMT2P34897 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.53□□□□□ -2
SHMT2P34897 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.53□□□□□ -2
SHMT2P34897 AC100870.1-201ENST00000522035 505 ntBASIC2.53□□□□□ -2
SHMT2P34897 AC087373.1-201ENST00000524920 491 ntBASIC2.53□□□□□ -2
SHMT2P34897 UBTFL10-201ENST00000528532 562 ntBASIC2.53□□□□□ -2
SHMT2P34897 AP000867.2-201ENST00000532468 320 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms