Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC6A4P31645 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC6A4P31645 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SLC6A4P31645 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC6A4P31645 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SLC6A4P31645 Y_RNA.813-201ENST00000364639 102 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 SNORA23-201ENST00000365128 182 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 SNORA70.4-201ENST00000365509 134 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC6A4P31645 MIR513A2-201ENST00000385249 127 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 MIR708-201ENST00000390708 88 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 AC110754.1-201ENST00000399740 601 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 RNU6ATAC-201ENST00000408749 126 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 CYCSP19-201ENST00000411715 316 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 RPL7AP73-201ENST00000413490 353 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 AC007390.1-201ENST00000415722 356 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.04□□□□□ -1.76
SLC6A4P31645 DUTP6-201ENST00000425573 462 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 RANP8-201ENST00000444720 713 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.04□□□□□ -1.76
SLC6A4P31645 SNRPFP3-201ENST00000457792 225 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.04□□□□□ -1.76
SLC6A4P31645 RPL31P61-201ENST00000496160 376 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 RPL23AP55-201ENST00000498163 452 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC6A4P31645 AC004062.1-201ENST00000509926 645 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.04□□□□□ -1.76
SLC6A4P31645 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.04□□□□□ -1.76
SLC6A4P31645 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.04□□□□□ -1.76
SLC6A4P31645 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC6A4P31645 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
SLC6A4P31645 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.04□□□□□ -1.76
SLC6A4P31645 AC024619.4-201ENST00000580924 316 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.04□□□□□ -1.76
SLC6A4P31645 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.04□□□□□ -1.76
SLC6A4P31645 AC174048.1-201ENST00000603389 144 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 RNU6-89P-201ENST00000606519 100 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 AL121757.2-201ENST00000611223 313 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 AC009248.2-201ENST00000619826 254 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC6A4P31645 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.04□□□□□ -1.76
SLC6A4P31645 AC018529.3-201ENST00000624212 2254 ntBASIC4.04□□□□□ -1.76
SLC6A4P31645 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
SLC6A4P31645 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SLC6A4P31645 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SLC6A4P31645 SNORD81.2-201ENST00000365153 76 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 SNORD115-7-201ENST00000365306 82 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 RNU6-61P-201ENST00000365528 109 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 SNORA24.1-201ENST00000384401 135 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 Y_RNA.535-201ENST00000384612 99 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 MIR30B-201ENST00000384850 88 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 MIR200C-201ENST00000384980 68 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 TXNP7-201ENST00000406296 293 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 RNU4-46P-201ENST00000410818 138 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 PPP1R11P2-201ENST00000423543 382 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 HMGB1P37-201ENST00000439613 609 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.03□□□□□ -1.76
SLC6A4P31645 NDUFS5P3-201ENST00000450668 321 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC6A4P31645 AC010631.1-201ENST00000474150 156 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 RPL21P99-201ENST00000480369 423 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 RN7SL323P-201ENST00000494712 295 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
SLC6A4P31645 AC092436.1-201ENST00000506450 503 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 SCARNA14-201ENST00000516903 136 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 RNU6-1314P-201ENST00000517139 104 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC6A4P31645 SUMO2P20-201ENST00000520803 283 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.03□□□□□ -1.76
SLC6A4P31645 AC103843.2-201ENST00000530523 682 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 OR5B10P-201ENST00000532869 642 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC6A4P31645 AC125611.2-201ENST00000551907 647 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 AC078814.3-201ENST00000553036 491 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 GNRHR2P1-201ENST00000555315 631 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 PSMA3P-201ENST00000555485 635 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.03□□□□□ -1.76
SLC6A4P31645 RPS3AP23-202ENST00000574601 686 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC6A4P31645 AC024220.1-201ENST00000603675 484 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 AL353621.2-201ENST00000605340 133 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC6A4P31645 AC011155.2-201ENST00000623202 216 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC6A4P31645 AC090617.10-201ENST00000624308 134 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 MTND1P37-201ENST00000636562 264 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC6A4P31645 API5P2-201ENST00000397055 1498 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SLC6A4P31645 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SLC6A4P31645 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SLC6A4P31645 AC106871.1-201ENST00000568324 3102 ntBASIC4.03□□□□□ -1.76
SLC6A4P31645 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SLC6A4P31645 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC6A4P31645 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
SLC6A4P31645 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SLC6A4P31645 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SLC6A4P31645 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SLC6A4P31645 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC6A4P31645 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms