Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 MTND4P20-201ENST00000424125 869 ntBASIC3.45□□□□□ -1.86
HOXC13P31276 MRPS10P2-201ENST00000431226 381 ntBASIC3.45□□□□□ -1.86
HOXC13P31276 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXC13P31276 AP000936.2-201ENST00000447151 681 ntBASIC3.45□□□□□ -1.86
HOXC13P31276 SNRPGP6-201ENST00000451124 220 ntBASIC3.45□□□□□ -1.86
HOXC13P31276 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXC13P31276 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXC13P31276 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
HOXC13P31276 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC13P31276 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC13P31276 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXC13P31276 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXC13P31276 SNORA31.26-201ENST00000517250 137 ntBASIC3.45□□□□□ -1.86
HOXC13P31276 OR5G4P-201ENST00000525251 760 ntBASIC3.45□□□□□ -1.86
HOXC13P31276 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC13P31276 AC109635.3-201ENST00000529536 185 ntBASIC3.45□□□□□ -1.86
HOXC13P31276 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
HOXC13P31276 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC13P31276 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC13P31276 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC13P31276 DUXAP1-201ENST00000556632 463 ntBASIC3.45□□□□□ -1.86
HOXC13P31276 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC13P31276 AC006362.1-201ENST00000567392 174 ntBASIC3.45□□□□□ -1.86
HOXC13P31276 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC13P31276 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC13P31276 MIR4276-201ENST00000584832 70 ntBASIC3.45□□□□□ -1.86
HOXC13P31276 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC13P31276 MIR4719-201ENST00000585233 84 ntBASIC3.45□□□□□ -1.86
HOXC13P31276 CKS1BP3-201ENST00000600888 237 ntBASIC3.45□□□□□ -1.86
HOXC13P31276 U6atac.1-201ENST00000616025 117 ntBASIC3.45□□□□□ -1.86
HOXC13P31276 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HOXC13P31276 SNORD39.4-201ENST00000620099 78 ntBASIC3.45□□□□□ -1.86
HOXC13P31276 AL359740.1-201ENST00000624340 592 ntBASIC3.45□□□□□ -1.86
HOXC13P31276 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC13P31276 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HOXC13P31276 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXC13P31276 AC008669.1-201ENST00000565823 2178 ntBASIC3.45□□□□□ -1.86
HOXC13P31276 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXC13P31276 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXC13P31276 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC13P31276 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC13P31276 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HOXC13P31276 SNORD113-6-201ENST00000363345 75 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 RNU1-105P-201ENST00000363470 161 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC13P31276 Y_RNA.517-201ENST00000384551 106 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 Y_RNA.553-201ENST00000384670 102 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 RPS3AP24-201ENST00000407896 734 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 RNA5SP31-201ENST00000411144 127 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 AL663109.1-201ENST00000411498 844 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 HMGN1P24-201ENST00000412282 298 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 FCF1P9-201ENST00000412546 282 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC13P31276 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC13P31276 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.44□□□□□ -1.86
HOXC13P31276 AC092573.2-201ENST00000434546 243 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXC13P31276 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC13P31276 RPL23AP35-201ENST00000451906 501 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXC13P31276 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC13P31276 AC110794.1-201ENST00000505816 425 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 ARL4AP2-201ENST00000507378 601 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC13P31276 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC13P31276 RNU6-720P-201ENST00000516363 108 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 RNU6-232P-201ENST00000517144 64 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC13P31276 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC13P31276 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXC13P31276 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.44□□□□□ -1.86
HOXC13P31276 AP004247.1-201ENST00000531556 1289 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXC13P31276 HIGD1AP1-201ENST00000550979 275 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 ACTR3BP3-201ENST00000565577 979 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC13P31276 MIR5004-201ENST00000579078 107 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC13P31276 RSL24D1P11-201ENST00000591045 491 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC13P31276 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC13P31276 AL356321.1-201ENST00000621360 228 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 AC068880.5-201ENST00000624331 290 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 AL008636.1-201ENST00000625038 1018 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 AL159972.1-201ENST00000625150 448 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 AC068137.3-201ENST00000639191 341 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 AC099654.10-201ENST00000640395 161 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 AC073869.6-201ENST00000640656 341 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HOXC13P31276 AL355596.1-201ENST00000565399 3996 ntBASIC3.44□□□□□ -1.86
HOXC13P31276 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC13P31276 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC13P31276 AC138915.1-201ENST00000565427 1685 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 AC092447.10-201ENST00000620607 1652 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXC13P31276 MTND4P29-201ENST00000503122 1372 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
HOXC13P31276 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HOXC13P31276 RNU1-70P-201ENST00000362618 164 ntBASIC3.43□□□□□ -1.86
HOXC13P31276 RNU6-744P-201ENST00000365557 107 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms