Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RPL23AP31-201ENST00000456160 467 ntBASIC4.38□□□□□ -1.71
HOXC12P31275 AC091153.1-201ENST00000466297 402 ntBASIC4.38□□□□□ -1.71
HOXC12P31275 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXC12P31275 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC12P31275 AC092436.3-201ENST00000511788 257 ntBASIC4.38□□□□□ -1.71
HOXC12P31275 AC069113.1-201ENST00000517763 267 ntBASIC4.38□□□□□ -1.71
HOXC12P31275 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC12P31275 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC12P31275 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC12P31275 AC091042.1-201ENST00000579213 173 ntBASIC4.38□□□□□ -1.71
HOXC12P31275 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC12P31275 AC008121.3-201ENST00000618726 433 ntBASIC4.38□□□□□ -1.71
HOXC12P31275 AL360181.4-201ENST00000621752 134 ntBASIC4.38□□□□□ -1.71
HOXC12P31275 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC12P31275 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC12P31275 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC12P31275 AC099654.2-201ENST00000433031 1980 ntBASIC4.38□□□□□ -1.71
HOXC12P31275 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HOXC12P31275 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
HOXC12P31275 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HOXC12P31275 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC12P31275 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC12P31275 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC12P31275 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HOXC12P31275 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC12P31275 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HOXC12P31275 Y_RNA.112-201ENST00000363250 102 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HOXC12P31275 RNU6-1040P-201ENST00000383974 107 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HOXC12P31275 RPL18P10-201ENST00000425606 538 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 AL732292.1-201ENST00000426692 226 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 AC236972.1-201ENST00000433225 199 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 RPL34P20-201ENST00000442771 351 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC12P31275 RNU7-138P-201ENST00000459479 64 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 RPL7P42-201ENST00000481005 679 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 SUMO2P6-201ENST00000505273 288 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 HMGB1P22-201ENST00000505315 124 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 AC021146.3-201ENST00000511911 260 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 AC007016.1-201ENST00000512110 244 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 AC026782.1-201ENST00000512952 449 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 RNU6-976P-201ENST00000516086 111 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 Y_RNA.670-201ENST00000516255 105 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 DNAJC8P1-201ENST00000554535 372 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 MED28P6-201ENST00000558776 231 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC12P31275 MIR3667-201ENST00000581025 74 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 AC100830.2-201ENST00000581636 240 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC12P31275 AC136443.5-201ENST00000603741 370 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 AC098826.3-201ENST00000603823 466 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 AC018462.2-201ENST00000605375 395 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 RNU6-85P-201ENST00000605989 107 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 AP005432.2-201ENST00000608162 586 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC12P31275 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC12P31275 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC12P31275 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC12P31275 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
HOXC12P31275 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC12P31275 AC139713.2-214ENST00000642059 1811 ntBASIC4.37□□□□□ -1.71
HOXC12P31275 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC12P31275 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC12P31275 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC12P31275 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC12P31275 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HOXC12P31275 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
HOXC12P31275 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC12P31275 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC12P31275 RNA5SP52-201ENST00000362448 134 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 SNORD62.1-201ENST00000362541 86 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 RNU6-1167P-201ENST00000363227 94 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 UBBP2-201ENST00000376781 231 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC12P31275 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HOXC12P31275 Y_RNA.404-201ENST00000383978 102 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 RNU6-890P-201ENST00000384121 107 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 RNU6-306P-201ENST00000384617 107 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 RNU6-1179P-201ENST00000384667 107 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 RNU6-328P-201ENST00000390887 106 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC12P31275 Y_RNA.594-201ENST00000410373 140 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC12P31275 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXC12P31275 AF186996.5-201ENST00000418098 904 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 EIF4EP1-201ENST00000422311 642 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 AC091390.3-201ENST00000426478 338 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 BX323845.1-201ENST00000432417 179 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 USP9YP7-201ENST00000436723 430 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXC12P31275 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC12P31275 USP9YP32-201ENST00000452432 430 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC12P31275 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
HOXC12P31275 RPL7P5-201ENST00000471472 736 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXC12P31275 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 AL359273.1-201ENST00000510918 627 ntBASIC4.36□□□□□ -1.71
HOXC12P31275 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms