Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AP000857.1-201ENST00000532151 543 ntBASIC3.6□□□□□ -1.83
TM4SF1P30408 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.6□□□□□ -1.83
TM4SF1P30408 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.6□□□□□ -1.83
TM4SF1P30408 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.6□□□□□ -1.83
TM4SF1P30408 OR4T1P-201ENST00000554933 911 ntBASIC3.6□□□□□ -1.83
TM4SF1P30408 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.6□□□□□ -1.83
TM4SF1P30408 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.6□□□□□ -1.83
TM4SF1P30408 AC083760.1-201ENST00000589621 670 ntBASIC3.6□□□□□ -1.83
TM4SF1P30408 AP000254.1-201ENST00000609934 520 ntBASIC3.6□□□□□ -1.83
TM4SF1P30408 AL590808.1-201ENST00000618696 141 ntBASIC3.6□□□□□ -1.83
TM4SF1P30408 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TM4SF1P30408 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TM4SF1P30408 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TM4SF1P30408 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
TM4SF1P30408 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TM4SF1P30408 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
TM4SF1P30408 SNORA23-201ENST00000365128 182 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
TM4SF1P30408 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.59□□□□□ -1.83
TM4SF1P30408 SNORD116-8-201ENST00000384365 95 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
TM4SF1P30408 RNU6-328P-201ENST00000390887 106 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 BMS1P22-201ENST00000414726 313 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 UBE2FP1-201ENST00000416536 447 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.59□□□□□ -1.83
TM4SF1P30408 AC006366.1-201ENST00000422002 759 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.59□□□□□ -1.83
TM4SF1P30408 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TM4SF1P30408 SSXP4-201ENST00000451349 245 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.59□□□□□ -1.83
TM4SF1P30408 RPS3P1-201ENST00000456781 192 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.59□□□□□ -1.83
TM4SF1P30408 AC135721.1-201ENST00000497954 479 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.59□□□□□ -1.83
TM4SF1P30408 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.59□□□□□ -1.83
TM4SF1P30408 AC109464.2-201ENST00000510242 943 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.59□□□□□ -1.83
TM4SF1P30408 MIR2114-201ENST00000516645 80 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 RNU6-1003P-201ENST00000517099 105 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.59□□□□□ -1.83
TM4SF1P30408 AC109446.2-201ENST00000567872 497 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 AC009101.1-201ENST00000568135 242 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 AF038458.1-201ENST00000588406 262 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 WISP1-OT1-201ENST00000602893 642 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 AC079089.3-201ENST00000603094 673 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.59□□□□□ -1.83
TM4SF1P30408 AC121247.2-201ENST00000604776 136 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 ZNF826P-207ENST00000622273 1910 ntBASIC3.59□□□□□ -1.83
TM4SF1P30408 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TM4SF1P30408 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
TM4SF1P30408 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.58□□□□□ -1.84
TM4SF1P30408 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.58□□□□□ -1.84
TM4SF1P30408 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.58□□□□□ -1.84
TM4SF1P30408 AL138713.1-201ENST00000624026 2130 ntBASIC3.58□□□□□ -1.84
TM4SF1P30408 RNA5SP68-201ENST00000363885 119 ntBASIC3.58□□□□□ -1.84
TM4SF1P30408 TXNP7-201ENST00000406296 293 ntBASIC3.58□□□□□ -1.84
TM4SF1P30408 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.58□□□□□ -1.84
TM4SF1P30408 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.58□□□□□ -1.84
TM4SF1P30408 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.58□□□□□ -1.84
TM4SF1P30408 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TM4SF1P30408 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.58□□□□□ -1.84
TM4SF1P30408 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.58□□□□□ -1.84
TM4SF1P30408 AC010095.1-201ENST00000443543 144 ntBASIC3.58□□□□□ -1.84
TM4SF1P30408 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.58□□□□□ -1.84
TM4SF1P30408 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.58□□□□□ -1.84
TM4SF1P30408 AL049874.1-201ENST00000489560 388 ntBASIC3.58□□□□□ -1.84
TM4SF1P30408 AF131216.2-201ENST00000512316 564 ntBASIC3.58□□□□□ -1.84
TM4SF1P30408 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.58□□□□□ -1.84
TM4SF1P30408 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.58□□□□□ -1.84
TM4SF1P30408 AC022690.1-201ENST00000526681 550 ntBASIC3.58□□□□□ -1.84
TM4SF1P30408 AL355836.1-201ENST00000555951 870 ntBASIC3.58□□□□□ -1.84
TM4SF1P30408 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.58□□□□□ -1.84
TM4SF1P30408 MIR3915-201ENST00000578518 97 ntBASIC3.58□□□□□ -1.84
TM4SF1P30408 CLIC4P2-201ENST00000601934 717 ntBASIC3.58□□□□□ -1.84
TM4SF1P30408 AC104763.2-201ENST00000604179 382 ntBASIC3.58□□□□□ -1.84
TM4SF1P30408 AC121334.2-201ENST00000605387 271 ntBASIC3.58□□□□□ -1.84
TM4SF1P30408 AC008962.1-201ENST00000605729 304 ntBASIC3.58□□□□□ -1.84
TM4SF1P30408 TUG1_2.1-201ENST00000614234 87 ntBASIC3.58□□□□□ -1.84
TM4SF1P30408 AC013476.2-201ENST00000614456 459 ntBASIC3.58□□□□□ -1.84
TM4SF1P30408 AC008121.2-201ENST00000614647 523 ntBASIC3.58□□□□□ -1.84
TM4SF1P30408 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.58□□□□□ -1.84
TM4SF1P30408 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
TM4SF1P30408 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TM4SF1P30408 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TM4SF1P30408 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TM4SF1P30408 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
TM4SF1P30408 RNU5A-8P-201ENST00000364102 114 ntBASIC3.57□□□□□ -1.84
TM4SF1P30408 RNU6-533P-201ENST00000384144 107 ntBASIC3.57□□□□□ -1.84
TM4SF1P30408 MIR887-201ENST00000401258 79 ntBASIC3.57□□□□□ -1.84
TM4SF1P30408 AL138827.1-201ENST00000402666 306 ntBASIC3.57□□□□□ -1.84
TM4SF1P30408 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TM4SF1P30408 HMGB3P23-201ENST00000414981 585 ntBASIC3.57□□□□□ -1.84
TM4SF1P30408 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.57□□□□□ -1.84
TM4SF1P30408 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.57□□□□□ -1.84
TM4SF1P30408 AC018630.2-202ENST00000422992 927 ntBASIC3.57□□□□□ -1.84
TM4SF1P30408 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.57□□□□□ -1.84
TM4SF1P30408 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.57□□□□□ -1.84
TM4SF1P30408 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.57□□□□□ -1.84
TM4SF1P30408 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms