Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ATF4P18848 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.38□□□□□ -1.71
ATF4P18848 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.37□□□□□ -1.71
ATF4P18848 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATF4P18848 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
ATF4P18848 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATF4P18848 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATF4P18848 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATF4P18848 AC007656.2-201ENST00000624902 4547 ntBASIC4.37□□□□□ -1.71
ATF4P18848 RNU6-884P-201ENST00000363889 107 ntBASIC4.37□□□□□ -1.71
ATF4P18848 RNU5E-7P-201ENST00000365290 117 ntBASIC4.37□□□□□ -1.71
ATF4P18848 Y_RNA.395-201ENST00000383945 109 ntBASIC4.37□□□□□ -1.71
ATF4P18848 RNU6-474P-201ENST00000384243 107 ntBASIC4.37□□□□□ -1.71
ATF4P18848 RPL23AP48-201ENST00000406913 488 ntBASIC4.37□□□□□ -1.71
ATF4P18848 NDUFS5P4-201ENST00000412983 318 ntBASIC4.37□□□□□ -1.71
ATF4P18848 RPL17P36-201ENST00000420302 549 ntBASIC4.37□□□□□ -1.71
ATF4P18848 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.37□□□□□ -1.71
ATF4P18848 USMG5P1-201ENST00000425964 177 ntBASIC4.37□□□□□ -1.71
ATF4P18848 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.37□□□□□ -1.71
ATF4P18848 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.37□□□□□ -1.71
ATF4P18848 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATF4P18848 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.37□□□□□ -1.71
ATF4P18848 BTF3P15-201ENST00000455606 336 ntBASIC4.37□□□□□ -1.71
ATF4P18848 snoU109.2-201ENST00000459316 135 ntBASIC4.37□□□□□ -1.71
ATF4P18848 U8.21-201ENST00000459536 136 ntBASIC4.37□□□□□ -1.71
ATF4P18848 AC108751.2-201ENST00000469993 231 ntBASIC4.37□□□□□ -1.71
ATF4P18848 RPL7P42-201ENST00000481005 679 ntBASIC4.37□□□□□ -1.71
ATF4P18848 DEFB109F-201ENST00000491870 277 ntBASIC4.37□□□□□ -1.71
ATF4P18848 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.37□□□□□ -1.71
ATF4P18848 AC113155.1-201ENST00000511141 769 ntBASIC4.37□□□□□ -1.71
ATF4P18848 ACA59.1-201ENST00000515966 143 ntBASIC4.37□□□□□ -1.71
ATF4P18848 Y_RNA.667-201ENST00000516212 107 ntBASIC4.37□□□□□ -1.71
ATF4P18848 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.37□□□□□ -1.71
ATF4P18848 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATF4P18848 AC009643.1-201ENST00000532030 391 ntBASIC4.37□□□□□ -1.71
ATF4P18848 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.37□□□□□ -1.71
ATF4P18848 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.37□□□□□ -1.71
ATF4P18848 AC122688.1-201ENST00000541494 223 ntBASIC4.37□□□□□ -1.71
ATF4P18848 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.37□□□□□ -1.71
ATF4P18848 NACAP3-201ENST00000552100 481 ntBASIC4.37□□□□□ -1.71
ATF4P18848 SNRPGP18-201ENST00000553000 214 ntBASIC4.37□□□□□ -1.71
ATF4P18848 H3F3AP1-201ENST00000559984 334 ntBASIC4.37□□□□□ -1.71
ATF4P18848 AMZ2P1-203ENST00000565833 850 ntBASIC4.37□□□□□ -1.71
ATF4P18848 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.37□□□□□ -1.71
ATF4P18848 AC005034.5-201ENST00000604219 466 ntBASIC4.37□□□□□ -1.71
ATF4P18848 AC018889.1-201ENST00000605372 397 ntBASIC4.37□□□□□ -1.71
ATF4P18848 AL161616.1-201ENST00000611867 286 ntBASIC4.37□□□□□ -1.71
ATF4P18848 AC004852.3-201ENST00000614131 326 ntBASIC4.37□□□□□ -1.71
ATF4P18848 AL161629.2-201ENST00000615347 275 ntBASIC4.37□□□□□ -1.71
ATF4P18848 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
ATF4P18848 AL136228.1-201ENST00000622221 319 ntBASIC4.37□□□□□ -1.71
ATF4P18848 AC073308.1-201ENST00000623696 305 ntBASIC4.37□□□□□ -1.71
ATF4P18848 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.37□□□□□ -1.71
ATF4P18848 U2.21-201ENST00000637295 81 ntBASIC4.37□□□□□ -1.71
ATF4P18848 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATF4P18848 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATF4P18848 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATF4P18848 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.37□□□□□ -1.71
ATF4P18848 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATF4P18848 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
ATF4P18848 AC107068.1-201ENST00000563286 4218 ntBASIC4.36□□□□□ -1.71
ATF4P18848 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.36□□□□□ -1.71
ATF4P18848 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ATF4P18848 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.36□□□□□ -1.71
ATF4P18848 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
ATF4P18848 MTND5P7-201ENST00000413558 1798 ntBASIC4.36□□□□□ -1.71
ATF4P18848 RNA5SP273-201ENST00000362484 113 ntBASIC4.36□□□□□ -1.71
ATF4P18848 RNU6-778P-201ENST00000363269 103 ntBASIC4.36□□□□□ -1.71
ATF4P18848 RNU6-827P-201ENST00000365553 106 ntBASIC4.36□□□□□ -1.71
ATF4P18848 RNU6-1040P-201ENST00000383974 107 ntBASIC4.36□□□□□ -1.71
ATF4P18848 Y_RNA.422-201ENST00000384054 114 ntBASIC4.36□□□□□ -1.71
ATF4P18848 RNU6-692P-201ENST00000384496 107 ntBASIC4.36□□□□□ -1.71
ATF4P18848 MIR1203-201ENST00000408812 85 ntBASIC4.36□□□□□ -1.71
ATF4P18848 SYF2P2-201ENST00000417620 583 ntBASIC4.36□□□□□ -1.71
ATF4P18848 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.36□□□□□ -1.71
ATF4P18848 CHEK2P5-201ENST00000423877 246 ntBASIC4.36□□□□□ -1.71
ATF4P18848 RPL23AP50-201ENST00000434149 455 ntBASIC4.36□□□□□ -1.71
ATF4P18848 NOTCH2P1-201ENST00000443481 624 ntBASIC4.36□□□□□ -1.71
ATF4P18848 AL590664.1-201ENST00000448065 339 ntBASIC4.36□□□□□ -1.71
ATF4P18848 RPL30P14-201ENST00000482744 348 ntBASIC4.36□□□□□ -1.71
ATF4P18848 AC096576.1-201ENST00000489014 359 ntBASIC4.36□□□□□ -1.71
ATF4P18848 IGBP1P4-201ENST00000503202 879 ntBASIC4.36□□□□□ -1.71
ATF4P18848 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ATF4P18848 RNU6-377P-201ENST00000515965 102 ntBASIC4.36□□□□□ -1.71
ATF4P18848 SNORD46.2-201ENST00000516021 102 ntBASIC4.36□□□□□ -1.71
ATF4P18848 RNU6-976P-201ENST00000516086 111 ntBASIC4.36□□□□□ -1.71
ATF4P18848 Y_RNA.687-201ENST00000516558 91 ntBASIC4.36□□□□□ -1.71
ATF4P18848 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.36□□□□□ -1.71
ATF4P18848 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ATF4P18848 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.36□□□□□ -1.71
ATF4P18848 HIGD1AP1-201ENST00000550979 275 ntBASIC4.36□□□□□ -1.71
ATF4P18848 TRAV32-201ENST00000553993 340 ntBASIC4.36□□□□□ -1.71
ATF4P18848 AC022432.1-201ENST00000595739 310 ntBASIC4.36□□□□□ -1.71
ATF4P18848 AC011494.1-201ENST00000596454 237 ntBASIC4.36□□□□□ -1.71
ATF4P18848 SNRPGP17-201ENST00000603780 214 ntBASIC4.36□□□□□ -1.71
ATF4P18848 AC015813.4-201ENST00000610469 179 ntBASIC4.36□□□□□ -1.71
ATF4P18848 MIR6809-201ENST00000612189 116 ntBASIC4.36□□□□□ -1.71
ATF4P18848 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.36□□□□□ -1.71
ATF4P18848 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.36□□□□□ -1.71
ATF4P18848 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms