Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SNORD3E-201ENST00000362899 217 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 RNU6-1287P-201ENST00000362914 107 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 Y_RNA.485-201ENST00000384395 102 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 RNU6-1060P-201ENST00000384664 107 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 RNU6-328P-201ENST00000390887 106 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 EIF4E2P1-201ENST00000393781 255 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 AC099677.1-201ENST00000420575 175 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 EIF4EP1-201ENST00000422311 642 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 AC004938.1-201ENST00000438468 308 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 RPL23AP89-201ENST00000439324 255 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 AC010631.1-201ENST00000474150 156 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 RPL23AP55-201ENST00000498163 452 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 AC104806.1-201ENST00000508720 308 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 RNU6-120P-201ENST00000516077 103 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 AC023157.2-201ENST00000540596 141 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 AC135001.1-201ENST00000544546 283 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 OR11H5P-201ENST00000554039 926 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 AL355810.1-201ENST00000614629 552 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 AL138726.1-201ENST00000614873 333 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 AL450472.3-201ENST00000615578 367 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 AC010378.1-201ENST00000619270 362 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 AL589994.2-201ENST00000621124 579 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 PCAT14-202ENST00000627127 3935 ntBASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 AL445487.1-201ENST00000415694 1580 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 XIAPP3-201ENST00000312918 795 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 RNU6-82P-201ENST00000363970 107 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 RNU6-593P-201ENST00000364716 112 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 RNU6-472P-201ENST00000384299 107 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 MIR548M-201ENST00000408260 86 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 SSXP9-201ENST00000417503 292 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 RPL35AP21-201ENST00000437667 333 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 AC004866.2-201ENST00000438285 481 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 AL121871.1-201ENST00000443413 436 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 GAPDHP27-201ENST00000447427 1020 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 AC034236.1-201ENST00000469891 373 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 AC116655.1-201ENST00000508324 901 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 RNU6-470P-201ENST00000515954 104 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 RNU2-53P-201ENST00000516257 147 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 AC006272.2-201ENST00000594725 163 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 MIR6128-201ENST00000615528 109 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 MIR492-201ENST00000638676 116 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 AC008079.2-201ENST00000623543 20396 ntBASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC6.01□□□□□ -1.45
CSB-PGBD3P0DP91 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 RHOT1P2-201ENST00000366423 333 ntBASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 RNU6-823P-201ENST00000391042 103 ntBASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 AL391417.1-201ENST00000404100 426 ntBASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 U3.35-201ENST00000408405 208 ntBASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 RNU2-43P-201ENST00000410306 190 ntBASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 RNU6-387P-201ENST00000411331 105 ntBASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 ACTR3BP6-201ENST00000422332 1241 ntBASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 AC245028.2-201ENST00000458673 253 ntBASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 RN7SL604P-201ENST00000492589 296 ntBASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 HIGD1AP13-201ENST00000509878 289 ntBASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 Y_RNA.670-201ENST00000516255 105 ntBASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 RNU6-789P-201ENST00000517105 102 ntBASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 RNU4-60P-201ENST00000517239 135 ntBASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 AC023632.4-201ENST00000517783 191 ntBASIC6□□□□□ -1.45
CSB-PGBD3P0DP91 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms