Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.71□□□□□ -2.14
COL4A1P02462 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL4A1P02462 SEM1P1-201ENST00000506694 209 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 AC121161.1-201ENST00000510606 652 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 AC087272.1-201ENST00000523624 533 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL4A1P02462 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.71□□□□□ -2.14
COL4A1P02462 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.71□□□□□ -2.14
COL4A1P02462 AL020997.3-201ENST00000602843 359 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 FRG1HP-204ENST00000617940 757 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.71□□□□□ -2.14
COL4A1P02462 MTND5P11-201ENST00000511037 1812 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 MTND5P10-201ENST00000603719 1809 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 RNU6-629P-201ENST00000384061 103 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 FO393413.1-201ENST00000402892 195 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.71□□□□□ -2.14
COL4A1P02462 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.71□□□□□ -2.14
COL4A1P02462 POLR2J4-204ENST00000418424 324 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 HMGN2P38-201ENST00000423806 265 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 AL445669.1-201ENST00000426743 755 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 DEFB130D-201ENST00000426866 237 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 AC006548.1-201ENST00000427470 102 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 RPL17P35-201ENST00000432217 549 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 AL512661.1-201ENST00000434586 1253 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.71□□□□□ -2.14
COL4A1P02462 MTND1P33-201ENST00000446251 917 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.71□□□□□ -2.14
COL4A1P02462 RPS15AP17-201ENST00000470598 390 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 RPL23AP41-201ENST00000484754 458 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.71□□□□□ -2.14
COL4A1P02462 COL6A4P2-205ENST00000509855 506 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.71□□□□□ -2.14
COL4A1P02462 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.71□□□□□ -2.14
COL4A1P02462 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.71□□□□□ -2.14
COL4A1P02462 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.71□□□□□ -2.14
COL4A1P02462 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.71□□□□□ -2.14
COL4A1P02462 MTCO3P24-201ENST00000572729 782 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 AC005776.1-201ENST00000603164 290 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 APOOP1-201ENST00000604695 592 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 AC006065.5-201ENST00000623427 349 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 CR381572.1-201ENST00000625098 102 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 SNORD56.4-201ENST00000363883 71 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 Y_RNA.374-201ENST00000365606 101 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 PRRC2CP1-201ENST00000404428 159 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 BX682237.1-201ENST00000415016 335 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 AC244098.2-201ENST00000422068 99 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 AC093422.3-201ENST00000428506 305 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.7□□□□□ -2.14
COL4A1P02462 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.7□□□□□ -2.14
COL4A1P02462 RPS15AP7-201ENST00000439294 405 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 RAB11AP1-201ENST00000442978 646 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.7□□□□□ -2.14
COL4A1P02462 NF1P3-201ENST00000457709 450 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 AC090515.1-201ENST00000465295 476 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.7□□□□□ -2.14
COL4A1P02462 AC009901.1-201ENST00000506703 541 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 AC006390.1-201ENST00000508068 283 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 AC110792.2-201ENST00000510278 224 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 SNORA76.2-201ENST00000517095 137 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 IGKV2D-36-201ENST00000518643 226 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 AC006518.2-201ENST00000542513 940 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.7□□□□□ -2.14
COL4A1P02462 AC068338.1-201ENST00000565567 176 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.7□□□□□ -2.14
COL4A1P02462 AL009028.1-201ENST00000604895 802 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 BNIP3P4-201ENST00000604946 565 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 AC112503.2-201ENST00000609005 552 ntBASIC1.7□□□□□ -2.14
COL4A1P02462 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.7□□□□□ -2.14
COL4A1P02462 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.7□□□□□ -2.14
COL4A1P02462 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.7□□□□□ -2.14
COL4A1P02462 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
COL4A1P02462 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
COL4A1P02462 RNU4-65P-201ENST00000410473 140 ntBASIC1.69□□□□□ -2.14
COL4A1P02462 UBE2V1P11-201ENST00000411559 285 ntBASIC1.69□□□□□ -2.14
COL4A1P02462 AL136133.1-201ENST00000413694 376 ntBASIC1.69□□□□□ -2.14
COL4A1P02462 AC004022.2-201ENST00000413824 193 ntBASIC1.69□□□□□ -2.14
COL4A1P02462 PNRC2P1-201ENST00000423940 420 ntBASIC1.69□□□□□ -2.14
COL4A1P02462 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.69□□□□□ -2.14
COL4A1P02462 AC002542.1-201ENST00000440683 193 ntBASIC1.69□□□□□ -2.14
COL4A1P02462 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.69□□□□□ -2.14
COL4A1P02462 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.69□□□□□ -2.14
COL4A1P02462 Z99714.1-201ENST00000450463 807 ntBASIC1.69□□□□□ -2.14
COL4A1P02462 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.69□□□□□ -2.14
COL4A1P02462 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.69□□□□□ -2.14
COL4A1P02462 RPL12P25-201ENST00000455592 494 ntBASIC1.69□□□□□ -2.14
COL4A1P02462 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.69□□□□□ -2.14
COL4A1P02462 GTF2IP12-201ENST00000456547 356 ntBASIC1.69□□□□□ -2.14
COL4A1P02462 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.69□□□□□ -2.14
COL4A1P02462 RPL37P25-201ENST00000507308 276 ntBASIC1.69□□□□□ -2.14
COL4A1P02462 AC008628.1-201ENST00000508663 265 ntBASIC1.69□□□□□ -2.14
COL4A1P02462 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.69□□□□□ -2.14
COL4A1P02462 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.69□□□□□ -2.14
COL4A1P02462 MIR4452-201ENST00000583004 71 ntBASIC1.69□□□□□ -2.14
COL4A1P02462 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.69□□□□□ -2.14
COL4A1P02462 AC005296.1-201ENST00000616145 209 ntBASIC1.69□□□□□ -2.14
COL4A1P02462 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.69□□□□□ -2.14
COL4A1P02462 AC020923.1-201ENST00000624021 917 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms