Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.87□□□□□ -1.79
TOP3BO95985 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TOP3BO95985 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.86□□□□□ -1.79
TOP3BO95985 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TOP3BO95985 PABPC1P7-201ENST00000413177 1513 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.86□□□□□ -1.79
TOP3BO95985 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TOP3BO95985 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TOP3BO95985 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TOP3BO95985 FRG1BP-201ENST00000278882 761 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 FRG1CP-201ENST00000358464 769 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 U3.15-201ENST00000365398 212 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 RNU6-356P-201ENST00000384140 107 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 RNU6-456P-201ENST00000384493 107 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 MIR490-201ENST00000384865 128 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 RNU6-332P-201ENST00000391193 108 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TOP3BO95985 AL356432.1-201ENST00000405809 419 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 MIR1250-201ENST00000408098 113 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 AC078974.1-201ENST00000411597 223 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 AL354751.2-201ENST00000415471 210 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 MRPL50P2-201ENST00000416821 482 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.86□□□□□ -1.79
TOP3BO95985 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.86□□□□□ -1.79
TOP3BO95985 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.86□□□□□ -1.79
TOP3BO95985 RPS20P32-201ENST00000456044 356 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 snoU13.8-201ENST00000458890 104 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 UBE2DNL-203ENST00000474922 222 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 UBE2CP3-201ENST00000502715 450 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.86□□□□□ -1.79
TOP3BO95985 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.86□□□□□ -1.79
TOP3BO95985 RNA5SP179-201ENST00000517284 121 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.86□□□□□ -1.79
TOP3BO95985 AC123904.2-201ENST00000548059 300 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.86□□□□□ -1.79
TOP3BO95985 AC055876.1-202ENST00000567053 138 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 MIR3167-201ENST00000579623 85 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 AC010928.3-201ENST00000587712 541 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 AC022432.1-201ENST00000595739 310 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 AL355812.1-201ENST00000603215 216 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 AC110741.2-201ENST00000605278 268 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.86□□□□□ -1.79
TOP3BO95985 OR10AB1P-201ENST00000609613 938 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 AL596245.1-201ENST00000618994 362 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 AC079684.1-201ENST00000621405 437 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 AC024940.5-201ENST00000622889 474 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.86□□□□□ -1.79
TOP3BO95985 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.86□□□□□ -1.79
TOP3BO95985 AC138649.5-201ENST00000637456 137 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.86□□□□□ -1.79
TOP3BO95985 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
TOP3BO95985 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TOP3BO95985 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TOP3BO95985 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.86□□□□□ -1.79
TOP3BO95985 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.86□□□□□ -1.79
TOP3BO95985 AC073073.2-201ENST00000609827 2578 ntBASIC3.86□□□□□ -1.79
TOP3BO95985 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TOP3BO95985 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.86□□□□□ -1.79
TOP3BO95985 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.86□□□□□ -1.79
TOP3BO95985 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TOP3BO95985 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TOP3BO95985 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.85□□□□□ -1.79
TOP3BO95985 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
TOP3BO95985 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TOP3BO95985 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TOP3BO95985 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
TOP3BO95985 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
TOP3BO95985 Y_RNA.157-201ENST00000363638 102 ntBASIC3.85□□□□□ -1.79
TOP3BO95985 Y_RNA.162-201ENST00000363683 102 ntBASIC3.85□□□□□ -1.79
TOP3BO95985 Y_RNA.166-201ENST00000363730 102 ntBASIC3.85□□□□□ -1.79
TOP3BO95985 RNA5SP267-201ENST00000364893 126 ntBASIC3.85□□□□□ -1.79
TOP3BO95985 RNU6-359P-201ENST00000365466 108 ntBASIC3.85□□□□□ -1.79
TOP3BO95985 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TOP3BO95985 RNU6-1227P-201ENST00000383981 107 ntBASIC3.85□□□□□ -1.79
TOP3BO95985 MIR124-3-201ENST00000384866 87 ntBASIC3.85□□□□□ -1.79
TOP3BO95985 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TOP3BO95985 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.85□□□□□ -1.79
TOP3BO95985 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.85□□□□□ -1.79
TOP3BO95985 AL139247.1-201ENST00000422768 325 ntBASIC3.85□□□□□ -1.79
TOP3BO95985 AC019097.1-201ENST00000424783 735 ntBASIC3.85□□□□□ -1.79
TOP3BO95985 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TOP3BO95985 RPL29P29-201ENST00000448725 423 ntBASIC3.85□□□□□ -1.79
TOP3BO95985 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.85□□□□□ -1.79
TOP3BO95985 RPL7P23-201ENST00000493874 747 ntBASIC3.85□□□□□ -1.79
TOP3BO95985 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.85□□□□□ -1.79
TOP3BO95985 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TOP3BO95985 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.85□□□□□ -1.79
TOP3BO95985 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.85□□□□□ -1.79
TOP3BO95985 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.85□□□□□ -1.79
TOP3BO95985 HPRT1P3-201ENST00000539521 576 ntBASIC3.85□□□□□ -1.79
TOP3BO95985 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.85□□□□□ -1.79
TOP3BO95985 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.85□□□□□ -1.79
TOP3BO95985 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.85□□□□□ -1.79
TOP3BO95985 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.85□□□□□ -1.79
TOP3BO95985 VN1R80P-201ENST00000597126 338 ntBASIC3.85□□□□□ -1.79
TOP3BO95985 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.85□□□□□ -1.79
TOP3BO95985 AC005344.1-201ENST00000613391 459 ntBASIC3.85□□□□□ -1.79
TOP3BO95985 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.85□□□□□ -1.79
TOP3BO95985 HSPA8P1-201ENST00000425843 1833 ntBASIC3.85□□□□□ -1.79
TOP3BO95985 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms