Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 U8.1-201ENST00000362843 134 ntBASIC0.51□□□□□ -2.33
USH2AO75445 MED14P1-201ENST00000430517 648 ntBASIC0.51□□□□□ -2.33
USH2AO75445 MTCO1P43-201ENST00000431831 488 ntBASIC0.51□□□□□ -2.33
USH2AO75445 RNA5SP67-201ENST00000516422 131 ntBASIC0.51□□□□□ -2.33
USH2AO75445 MIR514B-201ENST00000516774 80 ntBASIC0.51□□□□□ -2.33
USH2AO75445 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC0.51□□□□□ -2.33
USH2AO75445 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC0.51□□□□□ -2.33
USH2AO75445 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC0.51□□□□□ -2.33
USH2AO75445 CYCSP2-201ENST00000558168 301 ntBASIC0.51□□□□□ -2.33
USH2AO75445 AC002550.2-201ENST00000621246 394 ntBASIC0.51□□□□□ -2.33
USH2AO75445 AL158801.5-201ENST00000623123 465 ntBASIC0.51□□□□□ -2.33
USH2AO75445 AC090740.1-201ENST00000623193 2262 ntBASIC0.51□□□□□ -2.33
USH2AO75445 RPL5P19-201ENST00000404228 893 ntBASIC0.51□□□□□ -2.33
USH2AO75445 SNX3P1X-201ENST00000414887 175 ntBASIC0.51□□□□□ -2.33
USH2AO75445 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.51□□□□□ -2.33
USH2AO75445 RPS29P20-201ENST00000489592 171 ntBASIC0.51□□□□□ -2.33
USH2AO75445 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
USH2AO75445 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
USH2AO75445 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
USH2AO75445 LDHBP3-201ENST00000514909 822 ntBASIC0.51□□□□□ -2.33
USH2AO75445 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
USH2AO75445 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.51□□□□□ -2.33
USH2AO75445 AC017076.1-201ENST00000607613 578 ntBASIC0.51□□□□□ -2.33
USH2AO75445 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC0.51□□□□□ -2.33
USH2AO75445 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.51□□□□□ -2.33
USH2AO75445 UBE2V1P13-201ENST00000436983 439 ntBASIC0.51□□□□□ -2.33
USH2AO75445 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC0.51□□□□□ -2.33
USH2AO75445 SNORA48.9-201ENST00000516419 162 ntBASIC0.51□□□□□ -2.33
USH2AO75445 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.51□□□□□ -2.33
USH2AO75445 MIR3618-201ENST00000580330 88 ntBASIC0.51□□□□□ -2.33
USH2AO75445 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.51□□□□□ -2.33
USH2AO75445 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC0.51□□□□□ -2.33
USH2AO75445 NACAP2-201ENST00000318548 624 ntBASIC0.51□□□□□ -2.33
USH2AO75445 RNA5SP295-201ENST00000362655 121 ntBASIC0.51□□□□□ -2.33
USH2AO75445 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC0.51□□□□□ -2.33
USH2AO75445 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
USH2AO75445 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.51□□□□□ -2.33
USH2AO75445 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC0.51□□□□□ -2.33
USH2AO75445 AC104115.2-201ENST00000523026 687 ntBASIC0.51□□□□□ -2.33
USH2AO75445 FAM157A-202ENST00000615155 405 ntBASIC0.51□□□□□ -2.33
USH2AO75445 Y_RNA.804-201ENST00000615262 101 ntBASIC0.51□□□□□ -2.33
USH2AO75445 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.51□□□□□ -2.33
USH2AO75445 FTH1P15-201ENST00000406984 280 ntBASIC0.5□□□□□ -2.33
USH2AO75445 RNU2-70P-201ENST00000410718 179 ntBASIC0.5□□□□□ -2.33
USH2AO75445 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.5□□□□□ -2.33
USH2AO75445 RPL21P90-201ENST00000415692 466 ntBASIC0.5□□□□□ -2.33
USH2AO75445 AC109583.1-201ENST00000432156 268 ntBASIC0.5□□□□□ -2.33
USH2AO75445 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.5□□□□□ -2.33
USH2AO75445 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.5□□□□□ -2.33
USH2AO75445 AC009127.3-201ENST00000570531 403 ntBASIC0.5□□□□□ -2.33
USH2AO75445 MIR5694-201ENST00000581190 76 ntBASIC0.5□□□□□ -2.33
USH2AO75445 MIR3935-201ENST00000583472 104 ntBASIC0.5□□□□□ -2.33
USH2AO75445 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC0.5□□□□□ -2.33
USH2AO75445 FNDC3CP-201ENST00000420795 1155 ntBASIC0.5□□□□□ -2.33
USH2AO75445 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.5□□□□□ -2.33
USH2AO75445 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC0.5□□□□□ -2.33
USH2AO75445 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.5□□□□□ -2.33
USH2AO75445 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.5□□□□□ -2.33
USH2AO75445 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.5□□□□□ -2.33
USH2AO75445 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC0.5□□□□□ -2.33
USH2AO75445 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC0.5□□□□□ -2.33
USH2AO75445 XIAPP3-201ENST00000312918 795 ntBASIC0.5□□□□□ -2.33
USH2AO75445 RNU6-16P-201ENST00000384385 107 ntBASIC0.5□□□□□ -2.33
USH2AO75445 RNU6-30P-201ENST00000384561 107 ntBASIC0.5□□□□□ -2.33
USH2AO75445 RNA5SP465-201ENST00000391195 109 ntBASIC0.5□□□□□ -2.33
USH2AO75445 AL109741.2-201ENST00000455561 343 ntBASIC0.5□□□□□ -2.33
USH2AO75445 RPL23AP62-201ENST00000463396 453 ntBASIC0.5□□□□□ -2.33
USH2AO75445 AC008379.1-201ENST00000463655 464 ntBASIC0.5□□□□□ -2.33
USH2AO75445 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.5□□□□□ -2.33
USH2AO75445 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.5□□□□□ -2.33
USH2AO75445 AP003033.1-201ENST00000527244 415 ntBASIC0.5□□□□□ -2.33
USH2AO75445 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.5□□□□□ -2.33
USH2AO75445 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC0.5□□□□□ -2.33
USH2AO75445 AC018754.1-201ENST00000607486 925 ntBASIC0.5□□□□□ -2.33
USH2AO75445 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC0.5□□□□□ -2.33
USH2AO75445 AP002967.1-201ENST00000624203 539 ntBASIC0.5□□□□□ -2.33
USH2AO75445 AL356118.1-201ENST00000635272 1078 ntBASIC0.5□□□□□ -2.33
USH2AO75445 CNOT6LP1-201ENST00000559681 1462 ntBASIC0.5□□□□□ -2.33
USH2AO75445 MIR1912-201ENST00000410389 80 ntBASIC0.5□□□□□ -2.33
USH2AO75445 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC0.5□□□□□ -2.33
USH2AO75445 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC0.5□□□□□ -2.33
USH2AO75445 AC097499.1-201ENST00000444277 208 ntBASIC0.5□□□□□ -2.33
USH2AO75445 AC009901.1-201ENST00000506703 541 ntBASIC0.5□□□□□ -2.33
USH2AO75445 AC113155.1-201ENST00000511141 769 ntBASIC0.5□□□□□ -2.33
USH2AO75445 Y_RNA.700-201ENST00000516806 100 ntBASIC0.5□□□□□ -2.33
USH2AO75445 CBX3P7-201ENST00000532876 502 ntBASIC0.5□□□□□ -2.33
USH2AO75445 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.5□□□□□ -2.33
USH2AO75445 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC0.5□□□□□ -2.33
USH2AO75445 AC123912.5-201ENST00000605470 343 ntBASIC0.5□□□□□ -2.33
USH2AO75445 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
USH2AO75445 AL442644.1-201ENST00000454390 3105 ntBASIC0.49□□□□□ -2.33
USH2AO75445 Y_RNA.25-201ENST00000362528 102 ntBASIC0.49□□□□□ -2.33
USH2AO75445 HMGN2P35-201ENST00000412164 270 ntBASIC0.49□□□□□ -2.33
USH2AO75445 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.49□□□□□ -2.33
USH2AO75445 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.49□□□□□ -2.33
USH2AO75445 AC146507.1-201ENST00000468335 354 ntBASIC0.49□□□□□ -2.33
USH2AO75445 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC0.49□□□□□ -2.33
USH2AO75445 MTND4LP22-201ENST00000508209 276 ntBASIC0.49□□□□□ -2.33
USH2AO75445 RNU1-40P-201ENST00000516816 164 ntBASIC0.49□□□□□ -2.33
USH2AO75445 RNU1-97P-201ENST00000516872 164 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms