Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 RNU6-1151P-201ENST00000384684 107 ntBASIC2.52□□□□□ -2.01
BRD4O60885 AL627390.1-201ENST00000396055 340 ntBASIC2.52□□□□□ -2.01
BRD4O60885 MTND3P20-201ENST00000407663 186 ntBASIC2.52□□□□□ -2.01
BRD4O60885 RNU2-20P-201ENST00000410425 191 ntBASIC2.52□□□□□ -2.01
BRD4O60885 EIF1AXP1-201ENST00000419267 435 ntBASIC2.52□□□□□ -2.01
BRD4O60885 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.52□□□□□ -2.01
BRD4O60885 RNU7-26P-201ENST00000458980 63 ntBASIC2.52□□□□□ -2.01
BRD4O60885 RPS29P11-201ENST00000496507 171 ntBASIC2.52□□□□□ -2.01
BRD4O60885 GLYCAM1-201ENST00000546596 285 ntBASIC2.52□□□□□ -2.01
BRD4O60885 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.52□□□□□ -2.01
BRD4O60885 AL049838.1-201ENST00000563647 981 ntBASIC2.52□□□□□ -2.01
BRD4O60885 AC023824.2-201ENST00000566185 400 ntBASIC2.52□□□□□ -2.01
BRD4O60885 AC012254.4-201ENST00000588843 273 ntBASIC2.52□□□□□ -2.01
BRD4O60885 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.52□□□□□ -2.01
BRD4O60885 AC002487.1-201ENST00000604565 994 ntBASIC2.52□□□□□ -2.01
BRD4O60885 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
BRD4O60885 STMN1P1-201ENST00000617809 440 ntBASIC2.52□□□□□ -2.01
BRD4O60885 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
BRD4O60885 AC024595.1-201ENST00000623088 387 ntBASIC2.52□□□□□ -2.01
BRD4O60885 AC091953.2-201ENST00000623979 160 ntBASIC2.52□□□□□ -2.01
BRD4O60885 AC010872.1-201ENST00000624225 675 ntBASIC2.52□□□□□ -2.01
BRD4O60885 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.52□□□□□ -2.01
BRD4O60885 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
BRD4O60885 SNORD115-48-201ENST00000364764 76 ntBASIC2.51□□□□□ -2.01
BRD4O60885 AL355497.1-201ENST00000406262 551 ntBASIC2.51□□□□□ -2.01
BRD4O60885 RNA5SP489-201ENST00000410986 109 ntBASIC2.51□□□□□ -2.01
BRD4O60885 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.51□□□□□ -2.01
BRD4O60885 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.51□□□□□ -2.01
BRD4O60885 CR848007.2-201ENST00000424918 787 ntBASIC2.51□□□□□ -2.01
BRD4O60885 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.51□□□□□ -2.01
BRD4O60885 MTND4LP14-201ENST00000429447 288 ntBASIC2.51□□□□□ -2.01
BRD4O60885 MTND4LP7-201ENST00000431728 294 ntBASIC2.51□□□□□ -2.01
BRD4O60885 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.51□□□□□ -2.01
BRD4O60885 HMGN3P1-201ENST00000453847 193 ntBASIC2.51□□□□□ -2.01
BRD4O60885 AC015724.1-201ENST00000478577 156 ntBASIC2.51□□□□□ -2.01
BRD4O60885 SNORA25.15-201ENST00000516487 89 ntBASIC2.51□□□□□ -2.01
BRD4O60885 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.51□□□□□ -2.01
BRD4O60885 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.51□□□□□ -2.01
BRD4O60885 AP006248.3-201ENST00000623580 594 ntBASIC2.51□□□□□ -2.01
BRD4O60885 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
BRD4O60885 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
BRD4O60885 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.51□□□□□ -2.01
BRD4O60885 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
BRD4O60885 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
BRD4O60885 OR5T3-201ENST00000303059 1023 ntBASIC2.5□□□□□ -2.01
BRD4O60885 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.5□□□□□ -2.01
BRD4O60885 RNU6-444P-201ENST00000383988 108 ntBASIC2.5□□□□□ -2.01
BRD4O60885 RNU4-62P-201ENST00000410125 130 ntBASIC2.5□□□□□ -2.01
BRD4O60885 AL009174.1-201ENST00000426577 416 ntBASIC2.5□□□□□ -2.01
BRD4O60885 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.5□□□□□ -2.01
BRD4O60885 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
BRD4O60885 ZNF965P-201ENST00000432501 817 ntBASIC2.5□□□□□ -2.01
BRD4O60885 FABP5P3-201ENST00000437960 408 ntBASIC2.5□□□□□ -2.01
BRD4O60885 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.5□□□□□ -2.01
BRD4O60885 PNPLA4P1-201ENST00000458328 305 ntBASIC2.5□□□□□ -2.01
BRD4O60885 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
BRD4O60885 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.5□□□□□ -2.01
BRD4O60885 NDUFS5P6-201ENST00000529136 295 ntBASIC2.5□□□□□ -2.01
BRD4O60885 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.5□□□□□ -2.01
BRD4O60885 AC007375.1-201ENST00000554513 578 ntBASIC2.5□□□□□ -2.01
BRD4O60885 AC027104.1-201ENST00000563702 681 ntBASIC2.5□□□□□ -2.01
BRD4O60885 RPP40P2-201ENST00000603596 712 ntBASIC2.5□□□□□ -2.01
BRD4O60885 AC055876.5-201ENST00000605667 259 ntBASIC2.5□□□□□ -2.01
BRD4O60885 AC012467.1-201ENST00000607740 256 ntBASIC2.5□□□□□ -2.01
BRD4O60885 AC104307.1-201ENST00000616142 196 ntBASIC2.5□□□□□ -2.01
BRD4O60885 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
BRD4O60885 AC025016.1-201ENST00000616746 682 ntBASIC2.5□□□□□ -2.01
BRD4O60885 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
BRD4O60885 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
BRD4O60885 AC008568.2-201ENST00000623862 2313 ntBASIC2.5□□□□□ -2.01
BRD4O60885 Y_RNA.122-201ENST00000363331 96 ntBASIC2.49□□□□□ -2.01
BRD4O60885 RNU6-730P-201ENST00000383954 104 ntBASIC2.49□□□□□ -2.01
BRD4O60885 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.49□□□□□ -2.01
BRD4O60885 SEPT2P1-201ENST00000419651 180 ntBASIC2.49□□□□□ -2.01
BRD4O60885 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.49□□□□□ -2.01
BRD4O60885 RAB11AP1-201ENST00000442978 646 ntBASIC2.49□□□□□ -2.01
BRD4O60885 MTND5P8-201ENST00000449817 1083 ntBASIC2.49□□□□□ -2.01
BRD4O60885 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.49□□□□□ -2.01
BRD4O60885 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.49□□□□□ -2.01
BRD4O60885 SNORA70.16-201ENST00000516390 95 ntBASIC2.49□□□□□ -2.01
BRD4O60885 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.49□□□□□ -2.01
BRD4O60885 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.49□□□□□ -2.01
BRD4O60885 CYCSP26-201ENST00000534107 320 ntBASIC2.49□□□□□ -2.01
BRD4O60885 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.49□□□□□ -2.01
BRD4O60885 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC2.49□□□□□ -2.01
BRD4O60885 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.49□□□□□ -2.01
BRD4O60885 AC068790.3-201ENST00000602988 553 ntBASIC2.49□□□□□ -2.01
BRD4O60885 AL355802.4-201ENST00000607635 548 ntBASIC2.49□□□□□ -2.01
BRD4O60885 AL118508.4-201ENST00000624142 1176 ntBASIC2.49□□□□□ -2.01
BRD4O60885 AC092608.3-201ENST00000625017 386 ntBASIC2.49□□□□□ -2.01
BRD4O60885 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.49□□□□□ -2.01
BRD4O60885 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.49□□□□□ -2.01
BRD4O60885 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
BRD4O60885 RNU6-543P-201ENST00000362576 108 ntBASIC2.49□□□□□ -2.01
BRD4O60885 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.49□□□□□ -2.01
BRD4O60885 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.49□□□□□ -2.01
BRD4O60885 MORF4L1P7-201ENST00000426038 703 ntBASIC2.49□□□□□ -2.01
BRD4O60885 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.49□□□□□ -2.01
BRD4O60885 XKRY2-201ENST00000442362 1093 ntBASIC2.49□□□□□ -2.01
BRD4O60885 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms