Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AGGF1P5-201ENST00000567900 919 ntBASIC2.07□□□□□ -2.08
SGCEO43556 AC105137.2-201ENST00000569073 466 ntBASIC2.07□□□□□ -2.08
SGCEO43556 AC138915.2-201ENST00000569776 97 ntBASIC2.07□□□□□ -2.08
SGCEO43556 OR4K7P-201ENST00000580232 945 ntBASIC2.07□□□□□ -2.08
SGCEO43556 MIR3162-201ENST00000581818 82 ntBASIC2.07□□□□□ -2.08
SGCEO43556 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.07□□□□□ -2.08
SGCEO43556 AC006023.1-201ENST00000603944 259 ntBASIC2.07□□□□□ -2.08
SGCEO43556 AC103810.6-201ENST00000606708 136 ntBASIC2.07□□□□□ -2.08
SGCEO43556 FTX_3.1-201ENST00000610451 147 ntBASIC2.07□□□□□ -2.08
SGCEO43556 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.07□□□□□ -2.08
SGCEO43556 AC009090.3-201ENST00000616553 565 ntBASIC2.07□□□□□ -2.08
SGCEO43556 AC084824.4-201ENST00000620106 731 ntBASIC2.07□□□□□ -2.08
SGCEO43556 AC002550.2-201ENST00000621246 394 ntBASIC2.07□□□□□ -2.08
SGCEO43556 AC093875.1-201ENST00000623688 504 ntBASIC2.07□□□□□ -2.08
SGCEO43556 CTSLP2-204ENST00000629029 392 ntBASIC2.07□□□□□ -2.08
SGCEO43556 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.07□□□□□ -2.08
SGCEO43556 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.07□□□□□ -2.08
SGCEO43556 MTND4P35-201ENST00000604257 1375 ntBASIC2.07□□□□□ -2.08
SGCEO43556 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
SGCEO43556 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SGCEO43556 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SGCEO43556 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.06□□□□□ -2.08
SGCEO43556 RNU6-28P-201ENST00000362378 107 ntBASIC2.06□□□□□ -2.08
SGCEO43556 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.06□□□□□ -2.08
SGCEO43556 RNU6-1083P-201ENST00000384022 107 ntBASIC2.06□□□□□ -2.08
SGCEO43556 RNU6-140P-201ENST00000384566 108 ntBASIC2.06□□□□□ -2.08
SGCEO43556 MIR888-201ENST00000401186 77 ntBASIC2.06□□□□□ -2.08
SGCEO43556 AL355497.1-201ENST00000406262 551 ntBASIC2.06□□□□□ -2.08
SGCEO43556 U3.40-201ENST00000408706 208 ntBASIC2.06□□□□□ -2.08
SGCEO43556 AC023141.4-201ENST00000412031 328 ntBASIC2.06□□□□□ -2.08
SGCEO43556 NANOGP5-201ENST00000424456 877 ntBASIC2.06□□□□□ -2.08
SGCEO43556 MTATP6P11-201ENST00000428071 670 ntBASIC2.06□□□□□ -2.08
SGCEO43556 HMGB1P9-201ENST00000429856 646 ntBASIC2.06□□□□□ -2.08
SGCEO43556 SEPT7P5-201ENST00000434048 306 ntBASIC2.06□□□□□ -2.08
SGCEO43556 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.06□□□□□ -2.08
SGCEO43556 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.06□□□□□ -2.08
SGCEO43556 AL500527.1-201ENST00000448532 255 ntBASIC2.06□□□□□ -2.08
SGCEO43556 RPL26P9-201ENST00000457466 433 ntBASIC2.06□□□□□ -2.08
SGCEO43556 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.06□□□□□ -2.08
SGCEO43556 AP003467.2-201ENST00000520175 319 ntBASIC2.06□□□□□ -2.08
SGCEO43556 AC118942.1-201ENST00000529674 1035 ntBASIC2.06□□□□□ -2.08
SGCEO43556 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.06□□□□□ -2.08
SGCEO43556 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.06□□□□□ -2.08
SGCEO43556 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.06□□□□□ -2.08
SGCEO43556 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.06□□□□□ -2.08
SGCEO43556 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.06□□□□□ -2.08
SGCEO43556 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.06□□□□□ -2.08
SGCEO43556 MTND4LP5-201ENST00000605152 292 ntBASIC2.06□□□□□ -2.08
SGCEO43556 AC005332.6-201ENST00000613178 446 ntBASIC2.06□□□□□ -2.08
SGCEO43556 AC068057.2-201ENST00000624047 895 ntBASIC2.06□□□□□ -2.08
SGCEO43556 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SGCEO43556 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SGCEO43556 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
SGCEO43556 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SGCEO43556 MIRLET7G-201ENST00000362280 84 ntBASIC2.05□□□□□ -2.08
SGCEO43556 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
SGCEO43556 AL109755.1-201ENST00000401791 649 ntBASIC2.05□□□□□ -2.08
SGCEO43556 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.05□□□□□ -2.08
SGCEO43556 HMGB3P2-201ENST00000411913 584 ntBASIC2.05□□□□□ -2.08
SGCEO43556 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.05□□□□□ -2.08
SGCEO43556 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SGCEO43556 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.05□□□□□ -2.08
SGCEO43556 AC096649.2-201ENST00000416186 393 ntBASIC2.05□□□□□ -2.08
SGCEO43556 MTCYBP45-201ENST00000435243 565 ntBASIC2.05□□□□□ -2.08
SGCEO43556 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SGCEO43556 AC097493.1-201ENST00000463958 372 ntBASIC2.05□□□□□ -2.08
SGCEO43556 RPS27P21-201ENST00000486977 252 ntBASIC2.05□□□□□ -2.08
SGCEO43556 RN7SL636P-201ENST00000497504 294 ntBASIC2.05□□□□□ -2.08
SGCEO43556 TMEM251P1-201ENST00000503717 318 ntBASIC2.05□□□□□ -2.08
SGCEO43556 AC114981.1-201ENST00000503897 678 ntBASIC2.05□□□□□ -2.08
SGCEO43556 AC023141.11-201ENST00000508864 202 ntBASIC2.05□□□□□ -2.08
SGCEO43556 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.05□□□□□ -2.08
SGCEO43556 AC114781.4-201ENST00000513707 639 ntBASIC2.05□□□□□ -2.08
SGCEO43556 AC027338.1-201ENST00000514840 825 ntBASIC2.05□□□□□ -2.08
SGCEO43556 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.05□□□□□ -2.08
SGCEO43556 AP001646.1-201ENST00000527936 915 ntBASIC2.05□□□□□ -2.08
SGCEO43556 OR4R2P-201ENST00000530815 597 ntBASIC2.05□□□□□ -2.08
SGCEO43556 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.05□□□□□ -2.08
SGCEO43556 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SGCEO43556 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.05□□□□□ -2.08
SGCEO43556 AC027176.1-201ENST00000560204 514 ntBASIC2.05□□□□□ -2.08
SGCEO43556 RPS3AP23-202ENST00000574601 686 ntBASIC2.05□□□□□ -2.08
SGCEO43556 APOOP1-201ENST00000604695 592 ntBASIC2.05□□□□□ -2.08
SGCEO43556 SNORD14A-201ENST00000606526 91 ntBASIC2.05□□□□□ -2.08
SGCEO43556 AC010975.3-201ENST00000618727 978 ntBASIC2.05□□□□□ -2.08
SGCEO43556 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.05□□□□□ -2.08
SGCEO43556 AC073592.7-201ENST00000623659 507 ntBASIC2.05□□□□□ -2.08
SGCEO43556 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.05□□□□□ -2.08
SGCEO43556 AC012640.5-201ENST00000623897 319 ntBASIC2.05□□□□□ -2.08
SGCEO43556 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.05□□□□□ -2.08
SGCEO43556 RNU5B-1-201ENST00000363286 116 ntBASIC2.04□□□□□ -2.08
SGCEO43556 RNU5E-8P-201ENST00000363502 116 ntBASIC2.04□□□□□ -2.08
SGCEO43556 SNORA3A-201ENST00000364113 130 ntBASIC2.04□□□□□ -2.08
SGCEO43556 U3.12-201ENST00000364498 214 ntBASIC2.04□□□□□ -2.08
SGCEO43556 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SGCEO43556 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SGCEO43556 RNU6-220P-201ENST00000390919 107 ntBASIC2.04□□□□□ -2.08
SGCEO43556 RNU2-33P-201ENST00000410344 192 ntBASIC2.04□□□□□ -2.08
SGCEO43556 RNU6-1328P-201ENST00000410938 106 ntBASIC2.04□□□□□ -2.08
SGCEO43556 RN7SKP140-201ENST00000411196 284 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms