Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV4A0A0B4J268 LRRC37A5P-203ENST00000580181 585 ntBASIC1.56□□□□□ -2.16
TRAV4A0A0B4J268 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.56□□□□□ -2.16
TRAV4A0A0B4J268 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV4A0A0B4J268 DNAJC19P3-201ENST00000594491 331 ntBASIC1.56□□□□□ -2.16
TRAV4A0A0B4J268 MIR6130-201ENST00000619419 109 ntBASIC1.56□□□□□ -2.16
TRAV4A0A0B4J268 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.56□□□□□ -2.16
TRAV4A0A0B4J268 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV4A0A0B4J268 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV4A0A0B4J268 AL354685.2-201ENST00000448218 1447 ntBASIC1.56□□□□□ -2.16
TRAV4A0A0B4J268 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV4A0A0B4J268 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 RNU1-148P-201ENST00000384472 162 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 MTCO2P31-201ENST00000402702 684 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 AIMP1P2-201ENST00000425294 312 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 ZNF863P-201ENST00000426746 417 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 CBWD4P-201ENST00000445695 655 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 MTND5P8-201ENST00000449817 1083 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 PMCHL2-203ENST00000457791 237 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 AC080013.2-201ENST00000460866 323 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 MRPS17P9-201ENST00000511924 393 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 SCARNA16.3-201ENST00000516595 184 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 RNU6-885P-201ENST00000516607 104 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 RNU1-40P-201ENST00000516816 164 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 RNU1-97P-201ENST00000516872 164 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 RNA5SP291-201ENST00000517222 105 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 AP003122.3-201ENST00000526316 255 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 AC087276.1-201ENST00000529659 480 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 AP001317.1-201ENST00000531194 960 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 AC024224.1-201ENST00000538284 609 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 SNRPGP18-201ENST00000553000 214 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 MIR4287-201ENST00000579398 78 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 AP000403.1-201ENST00000603349 851 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 AC068313.1-201ENST00000604028 1008 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 AC004067.1-201ENST00000608733 700 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 AC011477.1-204ENST00000623416 1325 ntBASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
TRAV4A0A0B4J268 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 RNA5SP289-201ENST00000362332 137 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 MIR676-201ENST00000390702 67 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 RNU4-53P-201ENST00000410828 140 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AC003685.2-201ENST00000422795 395 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AC019178.2-201ENST00000423595 505 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 SDR42E1P3-201ENST00000438345 502 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AL353691.1-201ENST00000451332 387 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 USP9YP34-201ENST00000453983 808 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 SUMO2P2-201ENST00000456482 255 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 CDC42P1-201ENST00000456658 548 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AC069306.1-201ENST00000507006 843 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AC118282.2-201ENST00000508739 374 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AP002770.2-201ENST00000543613 532 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AC090502.2-201ENST00000549267 280 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AC009063.1-201ENST00000563342 702 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AC069294.1-201ENST00000608397 350 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 MIR6873-201ENST00000622788 63 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 AC026634.1-201ENST00000634369 198 ntBASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV4A0A0B4J268 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV4A0A0B4J268 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV4A0A0B4J268 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV4A0A0B4J268 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV4A0A0B4J268 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV4A0A0B4J268 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV4A0A0B4J268 Y_RNA.510-201ENST00000384511 114 ntBASIC1.53□□□□□ -2.16
TRAV4A0A0B4J268 RNU6-140P-201ENST00000384566 108 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms