Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MIR585-201ENST00000384887 94 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 RPL12P3-201ENST00000440080 396 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 NDUFB4P10-201ENST00000452541 359 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 AZGP1P2-201ENST00000454506 345 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 AL356981.1-201ENST00000454879 684 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 RPL7AP6-201ENST00000477943 801 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 AC109479.2-201ENST00000517842 174 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 AC021006.3-201ENST00000530771 192 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 AP002392.1-201ENST00000537692 208 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 SRGNP1-201ENST00000603392 451 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 AL161629.2-201ENST00000615347 275 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 AP001005.3-201ENST00000622049 129 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 AC074101.1-201ENST00000637861 241 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 SMG1P6-201ENST00000532337 2930 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 MIR153-1-201ENST00000384914 90 ntBASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 AL022722.2-201ENST00000402519 180 ntBASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 OR4C10P-201ENST00000434991 931 ntBASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 NDUFB4P8-201ENST00000435351 367 ntBASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 AC013470.1-201ENST00000453438 462 ntBASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 RNU7-87P-201ENST00000459343 62 ntBASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 RPS29P27-201ENST00000463711 170 ntBASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 RPL7P49-201ENST00000471402 708 ntBASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 RPS18P6-201ENST00000476880 458 ntBASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 RN7SL97P-201ENST00000486780 299 ntBASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 AC008953.1-201ENST00000497334 318 ntBASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 AK3P2-201ENST00000507976 429 ntBASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 AC107393.1-201ENST00000512403 346 ntBASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 Y_RNA.706-201ENST00000516933 99 ntBASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB11Q9Y5F2 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 ABCC13-202ENST00000463099 3842 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 AL391684.1-202ENST00000641293 1636 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 RNU6-1074P-201ENST00000383995 104 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 MIR550A3-201ENST00000390735 95 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 AL079342.1-201ENST00000401460 267 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 LAP3P1-201ENST00000403648 294 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 RNU6-1140P-201ENST00000410517 106 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 GPS2P1-201ENST00000411761 986 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 PIGFP3-201ENST00000441918 722 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 RPS11P7-201ENST00000442125 465 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 TMSB4XP3-201ENST00000445144 114 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 RPL21P13-201ENST00000488305 481 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 CASP1P1-201ENST00000526345 212 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 AC004024.1-201ENST00000549244 247 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 EDDM3DP-201ENST00000554692 434 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 HMGB1P14-201ENST00000557424 591 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 RN7SL708P-201ENST00000580952 299 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 RPL23AP78-201ENST00000599928 470 ntBASIC5.31□□□□□ -1.56
PCDHB11Q9Y5F2 AC008121.1-201ENST00000603244 268 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms